KEGG   Culicoides brevitarsis: 134836556
Entry
134836556         CDS       T10947                                 
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
cbri  Culicoides brevitarsis
Pathway
cbri03013  Nucleocytoplasmic transport
cbri03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134836556
  09122 Translation
   03013 Nucleocytoplasmic transport
    134836556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbri03019]
    134836556
   03041 Spliceosome [BR:cbri03041]
    134836556
Messenger RNA biogenesis [BR:cbri03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     134836556
Spliceosome [BR:cbri03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    134836556
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 134836556
NCBI-ProteinID: XP_063707815
LinkDB
Position
Unknown
AA seq 557 aa
MVNKSDVKEKDAKRRKTSTGSETTPTKVIPKDDVYASVINYEEQEAQKRSADKDAALFKE
TCEKFKQIISEVSELKKQQTPENDEEIKAKIEEKRIEGSLLFILLKKLNRLDKLRVRAGR
DALNAEKVRVDNIKLQLHNLAYEAEHLKKEVKRCHDFKSQDEEIELVEIDEFYEKAPASI
SRPEKTKKDEHALRLARLEWELEQRKDLDAQCRELISAKKQISKNIITKTERLDSLKPRL
KTLLEATRPLQEALDLKIEDQWEIQKCVRLLPNPLYLLYANVVAFSEACDPLITTTINGD
EEDARQEIEPKNDLDESLAATEETNHDSDNDENEGDVDAESAPKKRHHHNRQSKMAAMGQ
KKDLLFKPHPLSITVTISTKEKGIALAITFNYIPGLHIVTTNSKLVNFDVAGVAAGEVIL
VETLLNSLFPGDFGKLSPNPRTKYQLEELQITPGEFLSFLSQKQLGKPYMWAQRACGLDF
INTSTNSTSANLAETTIPQIIKQIRARLQARVKLYKQILALESGKIDGAGKGDAIGTRVS
GHLVQWSAISYEEYQMC
NT seq 1671 nt   +upstreamnt  +downstreamnt
atggtcaacaaatccgacgtcaaagaaaaagatgcaaaacggcgaaaaacatcaacagga
agcgaaacaactcccacaaaagtcatccctaaagacgatgtttatgcgagcgtcataaac
tacgaagaacaagaagcgcaaaaacgttccgctgacaaagatgccgctctcttcaaagaa
acttgcgaaaaattcaaacaaatcatctccgaagtgtcagaattaaaaaagcaacaaact
cccgaaaacgacgaagaaataaaagcaaaaattgaagaaaagcggattgaaggttcgtta
ctttttattttgctgaagaagttgaatcgcttggataaacttcgagtacgtgccggacgt
gacgctttgaacgcggaaaaagttcgtgttgacaacatcaagcttcagctgcacaatttg
gcgtacgaagcggaacatttgaagaaggaagtcaagcgttgtcacgatttcaagagtcag
gacgaggaaattgagttggttgaaattgatgaattttacgaaaaagctcccgcgagtatt
tcgcgcccggaaaagaccaaaaaagacgaacatgcgttgcgtttggctcgtctggaatgg
gaattggagcaaagaaaggacctcgacgcccaatgtagagagttaatttcggcgaaaaag
caaatttcgaagaatattatcacaaaaacggagcgattggattcgttaaagcctcgttta
aagacacttttggaagcaacgcgtcccctgcaagaagctctggacctaaaaatcgaagat
caatgggaaattcagaaatgcgtgcgacttttgcccaatccgctgtatttgttgtacgca
aatgtcgtcgcttttagtgaggcatgcgatccgttgatcacgacaaccatcaatggcgac
gaggaagatgcccgacaagaaattgagccgaaaaatgacctcgacgagagtttagcggcg
accgaggagacaaatcacgacagcgacaacgacgaaaatgaaggagatgtcgatgcggaa
tcagctccgaagaagcggcatcatcacaatcgtcaatccaagatggcggcgatgggacaa
aagaaggatttgctcttcaaacctcatcccttatccattacggtgacaattagcacgaaa
gaaaagggaattgcgcttgccataacgtttaattacatcccgggcttgcatattgtgacg
acaaattcgaaacttgtgaatttcgatgtcgctggagtcgctgcgggtgaggttatcctc
gttgaaacgctcttaaacagtcttttccccggagattttggcaaattaagcccaaatcca
cgcacaaaataccaattggaagaacttcagatcactccgggggaatttttgtcgttttta
tcgcaaaaacaactcggcaagccttatatgtgggcgcaacgggcatgcggattggatttt
attaatacttcaactaattcaacgtcagctaatctcgcggaaactacaattccgcaaatt
attaaacagattcgggccagattgcaagcccgtgtgaagctttataagcaaattttggca
ttagaatcgggtaaaattgatggcgcaggtaagggagatgcaattgggactcgtgtttcg
ggacatttggttcaatggagcgccatttcgtatgaggaatatcaaatgtgc

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