Culicoides brevitarsis: 134836556
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Entry
134836556 CDS
T10947
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
cbri Culicoides brevitarsis
Pathway
cbri03013
Nucleocytoplasmic transport
cbri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134836556
09122 Translation
03013 Nucleocytoplasmic transport
134836556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbri03019
]
134836556
03041 Spliceosome [BR:
cbri03041
]
134836556
Messenger RNA biogenesis [BR:
cbri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134836556
Spliceosome [BR:
cbri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134836556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
134836556
NCBI-ProteinID:
XP_063707815
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MVNKSDVKEKDAKRRKTSTGSETTPTKVIPKDDVYASVINYEEQEAQKRSADKDAALFKE
TCEKFKQIISEVSELKKQQTPENDEEIKAKIEEKRIEGSLLFILLKKLNRLDKLRVRAGR
DALNAEKVRVDNIKLQLHNLAYEAEHLKKEVKRCHDFKSQDEEIELVEIDEFYEKAPASI
SRPEKTKKDEHALRLARLEWELEQRKDLDAQCRELISAKKQISKNIITKTERLDSLKPRL
KTLLEATRPLQEALDLKIEDQWEIQKCVRLLPNPLYLLYANVVAFSEACDPLITTTINGD
EEDARQEIEPKNDLDESLAATEETNHDSDNDENEGDVDAESAPKKRHHHNRQSKMAAMGQ
KKDLLFKPHPLSITVTISTKEKGIALAITFNYIPGLHIVTTNSKLVNFDVAGVAAGEVIL
VETLLNSLFPGDFGKLSPNPRTKYQLEELQITPGEFLSFLSQKQLGKPYMWAQRACGLDF
INTSTNSTSANLAETTIPQIIKQIRARLQARVKLYKQILALESGKIDGAGKGDAIGTRVS
GHLVQWSAISYEEYQMC
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacaaatccgacgtcaaagaaaaagatgcaaaacggcgaaaaacatcaacagga
agcgaaacaactcccacaaaagtcatccctaaagacgatgtttatgcgagcgtcataaac
tacgaagaacaagaagcgcaaaaacgttccgctgacaaagatgccgctctcttcaaagaa
acttgcgaaaaattcaaacaaatcatctccgaagtgtcagaattaaaaaagcaacaaact
cccgaaaacgacgaagaaataaaagcaaaaattgaagaaaagcggattgaaggttcgtta
ctttttattttgctgaagaagttgaatcgcttggataaacttcgagtacgtgccggacgt
gacgctttgaacgcggaaaaagttcgtgttgacaacatcaagcttcagctgcacaatttg
gcgtacgaagcggaacatttgaagaaggaagtcaagcgttgtcacgatttcaagagtcag
gacgaggaaattgagttggttgaaattgatgaattttacgaaaaagctcccgcgagtatt
tcgcgcccggaaaagaccaaaaaagacgaacatgcgttgcgtttggctcgtctggaatgg
gaattggagcaaagaaaggacctcgacgcccaatgtagagagttaatttcggcgaaaaag
caaatttcgaagaatattatcacaaaaacggagcgattggattcgttaaagcctcgttta
aagacacttttggaagcaacgcgtcccctgcaagaagctctggacctaaaaatcgaagat
caatgggaaattcagaaatgcgtgcgacttttgcccaatccgctgtatttgttgtacgca
aatgtcgtcgcttttagtgaggcatgcgatccgttgatcacgacaaccatcaatggcgac
gaggaagatgcccgacaagaaattgagccgaaaaatgacctcgacgagagtttagcggcg
accgaggagacaaatcacgacagcgacaacgacgaaaatgaaggagatgtcgatgcggaa
tcagctccgaagaagcggcatcatcacaatcgtcaatccaagatggcggcgatgggacaa
aagaaggatttgctcttcaaacctcatcccttatccattacggtgacaattagcacgaaa
gaaaagggaattgcgcttgccataacgtttaattacatcccgggcttgcatattgtgacg
acaaattcgaaacttgtgaatttcgatgtcgctggagtcgctgcgggtgaggttatcctc
gttgaaacgctcttaaacagtcttttccccggagattttggcaaattaagcccaaatcca
cgcacaaaataccaattggaagaacttcagatcactccgggggaatttttgtcgttttta
tcgcaaaaacaactcggcaagccttatatgtgggcgcaacgggcatgcggattggatttt
attaatacttcaactaattcaacgtcagctaatctcgcggaaactacaattccgcaaatt
attaaacagattcgggccagattgcaagcccgtgtgaagctttataagcaaattttggca
ttagaatcgggtaaaattgatggcgcaggtaagggagatgcaattgggactcgtgtttcg
ggacatttggttcaatggagcgccatttcgtatgaggaatatcaaatgtgc
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