Culicoides brevitarsis: 134836953
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Entry
134836953 CDS
T10947
Name
(RefSeq) protein strawberry notch
KO
K26273
protein strawberry notch
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cbri03036
]
134836953
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
134836953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
DUF5844
Helicase_C
SR-25
Macoilin
Motif
Other DBs
NCBI-GeneID:
134836953
NCBI-ProteinID:
XP_063708314
LinkDB
All DBs
Position
1:22980612..22986771
Genome browser
AA seq
1302 aa
AA seq
DB search
MEKDNVFDVDNLSSSESDFDEDEDPDKVEVPGGGIDLATISNVKKAKPEESLSVHKKSNP
NVEPTGMNVSNTAMFSPSMFLAQMEMALGGGSSRGSVPHFNQIMLQNLQSMLLANPSYLT
GGIPNKLLSQMWTPDLANKTTTNISSINHEPEEEEPDDEEIGVAETYSDYMPTKLKLGRK
HPDPVVETASLSSVEPADVYYSLSIPNETILNCQLSALQLEAIVYACQAHDHFLPDGSRA
GFLIGDGAGVGKGRTIAGLIFENYLKGRKKAIWLSVSNDLKYDCERDLRDIGASRVEVYS
LSKLKYAKINSSANNNIRKGVIFGTYSALIGESQNNTIKYKSRLKQILQWCGEDFDGLIV
FDECHKAKNLCPTGSSKPTKTGLTALALQNKLPKARVVYASATGASEPRNMAYMVRLGIW
GQGTPFPTFNDFISAVEKRGVGAMEIVAMDMKLRGMYIARQLSFHGVGFKIEEVPLSKEF
KKVYDASVELWVEAMQKFTEAAELIDAESRMKKTMWGQFWSAHQRFFKYLCIAAKVNHCV
KIASEAIKYGKCVVIGLQSTGEARTLEQLERDDGELTDFVSTAKGVFQSLVEKHFPAPDR
SRISRLLGIETGGNKTMLERIMEEKPSTSTSENKRKNSTTRELSHRTKKTKHNETDYEYD
SSQSNASDSESDGSDHVSDSSGSSDYNPFGSDSDSDADPWVGKPKKEKKVKSPPKKKAVS
TQEKIHEHITKKQNDTKPNIFQANGFSITLGPPPKDAIERACEMKDELLLKIERLGERLP
PNTLDQLIDELGGPENVAEMTGRKGRVVQTDRGNIQYESRSEQDVSLEILNLTEKQRFMN
GEKDVAIISEAASSGVSLQSDRRVKNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAP
EYVFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGKSALESVM
KTIMQYEKPMVPPPQDYKGDFFKDIAAALVGVGLIVNSEQMPGVLTFDKDYNNISKFLNR
ILGIPVELQNRLFKYFTDTLAATILQAKKLGKFDLGILDLGAAGENVKPTKIIKFTRKHS
TGVAPCELYTVQVERGMIWQEAIEKWAELADPKEGFYLSNQMRNEKATAILAVKLENNSK
KKYDNTNKSKKEQIMFQIYRPNTGLQIRHESLFELEKKYKKVTSEEAEAAWTEQYDSSIN
TCSHAYWRGNCKNINMGLECETGLRRRTYHVLAGTVLSVWARVENLLATRAGQNNKMQVI
RLRPTEDKKIVGTLIPKNCVEPLIQSLSSDAEKVEETTFEKR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggataacgtatttgatgtagacaacttgagttctagcgaatcagacttcgat
gaggatgaagatccagacaaagtggaagtacctggaggaggtatcgatttagcaactatt
tcaaatgtcaagaaagcaaaaccagaggaaagcttgtctgtacataaaaaaagtaatcct
aatgtcgaaccaacaggtatgaatgtaagcaacacagctatgttctcaccaagtatgttt
ctagctcaaatggaaatggctttaggagggggctctagtcgaggaagtgtaccacatttt
aatcaaattatgttacaaaatctgcaatcaatgttgcttgcaaatccatcttacttgact
ggagggattcccaacaaattactatctcaaatgtggactccagatctagcaaataaaact
acaaccaatatttcgtcgataaaccacgaaccagaagaagaagagccagatgacgaagaa
ataggtgtggcagaaacctatagtgattacatgccaacaaaattgaaacttggacgcaaa
catcctgatcctgttgtagagactgcatctctgtcgtctgttgaacccgccgatgtatat
tacagtttatcgataccaaacgaaactattttgaattgtcaactaagtgcacttcaatta
gaagccattgtatatgcttgccaagcacatgaccattttctaccagatggttcaagagcg
ggctttttaataggtgacggcgctggtgtagggaaaggacgaacaatcgcaggactgata
tttgaaaattatttaaagggtagaaaaaaagcgatttggttgtcggtgtccaacgattta
aaatacgattgtgaacgagacttgcgtgatattggagcatctcgtgttgaagtttattcg
ttgagtaaacttaaatatgctaaaataaattcatcggcaaataacaacattagaaaaggc
gtgatatttggaacatattctgctttgattggggagtcacaaaataatacaataaagtat
aaaagtcgattaaagcagatactgcaatggtgtggcgaagattttgatggtttaattgta
tttgatgaatgtcataaggccaaaaacttgtgtccaactggttcaagtaaaccaacaaaa
actggtttaaccgcattagctcttcaaaacaaattacctaaagcaagagttgtttatgca
tcggcaaccggagcatctgaacccagaaatatggcgtacatggtaagactaggaatttgg
gggcaaggtacaccctttcctacatttaatgattttattagcgctgtggagaaacgtggg
gtgggtgcaatggaaatcgttgccatggatatgaaacttcgaggaatgtatattgctcga
caattgagttttcacggcgtcggttttaaaatcgaggaagttcctttatctaaggaattt
aaaaaagtgtacgacgcttccgtagaactgtgggttgaagctatgcaaaaatttacagaa
gctgctgaattgatcgacgcggaaagcagaatgaaaaaaaccatgtggggccaattttgg
tcggctcaccaacgttttttcaaatatctttgtattgcagcaaaagtaaatcactgtgtg
aaaattgctagtgaagcaataaaatatggaaaatgtgttgtaattggcttacaatcaact
ggcgaagcaagaacattagaacaattggaaagggatgacggtgagcttacagatttcgtt
tcaactgcaaagggagtttttcaatcattagttgaaaaacatttcccagcccccgataga
agtcgaatcagcagacttcttggaatagaaactggaggaaataaaaccatgcttgagcga
attatggaggaaaaaccatcaactagtacttcggaaaataaaagaaaaaatagtacaacg
cgagagttatcacatcgtaccaagaaaacaaagcataacgaaacagattatgaatacgac
tcatctcaatcgaatgcatctgatagtgaaagtgacggaagtgatcatgtatcagacagt
agtggaagtagtgattataatcctttcggctccgattctgattcagatgctgatccttgg
gtgggaaagcctaaaaaggagaagaaagtcaagtcaccaccaaaaaaaaaagctgtttcg
actcaagagaaaattcatgagcatattactaaaaagcaaaacgatacaaagccaaatatt
tttcaagccaatgggttttcgattacattaggacctccaccaaaagatgcaatcgaaaga
gcgtgtgagatgaaggatgagcttttacttaaaattgaacgactaggtgaacgattacca
cctaatacgttagatcagttgattgacgaattaggtggacctgaaaatgttgctgaaatg
actggtcgtaagggtagagtggtacaaacggatcggggaaacatccaatacgaatcccgc
tccgaacaagatgtgtcgcttgaaatattaaatttgacagaaaaacaaagattcatgaat
ggtgagaaagatgttgctattatatcagaagcagcgtcgagcggtgtatctctacagagc
gatcggcgagtcaaaaatcaaagacgacgtgtgcatattacattggagttgccatggtcg
gccgacagagctattcaacaattcggtcgaactcatcgttcaaatcaagtaaatgctcca
gaatatgtatttttgatatctgatcttgcaggagaacgtcgatttgcttccactgtagca
aaacgtttagaatctttaggtgctctaacgcacggtgacagacgagccactgaaacacga
gacttatcacaattcaatattgacaacaaatatggaaaaagtgcactagaatctgtgatg
aaaactatcatgcaatatgaaaagcccatggtaccgccccctcaagattacaaaggagat
tttttcaaagacatagctgctgctttggttggtgtgggcttgatagttaacagtgaacag
atgccgggtgtgcttacttttgacaaagattataataacatttcgaagttcctcaataga
attttaggcattccagttgaattacagaatcgccttttcaaatattttacagacacgctt
gcagcaactatacttcaggcgaagaaacttggtaaatttgatcttggtattttagatttg
ggtgctgcaggagagaatgtgaaaccgacaaaaataattaaatttacaaggaaacattca
actggagtggccccttgcgaactatatactgtacaagttgagcgaggaatgatatggcaa
gaagctatagaaaaatgggctgaacttgccgatcctaaggaaggattttatttatcaaat
caaatgagaaatgaaaaagcaactgcaattctagctgtcaagcttgaaaataattcaaaa
aagaaatacgataatacaaataaaagtaagaaggagcaaatcatgttccagatatataga
ccaaatacaggattgcaaataaggcacgaaagtttgtttgaactcgaaaaaaaatataaa
aaagtgacatctgaagaagctgaagcagcgtggacagaacaatatgattctagtataaat
acatgttcacatgcctactggagaggaaattgtaaaaatatcaatatgggcttagagtgt
gaaacaggattacgacgtcggacgtatcatgttttagccggcacagttttatcggtttgg
gctagagttgaaaatttgctagcaactagggctggccaaaataacaaaatgcaagttata
cgtttgaggccaacagaagacaaaaagatagttggtactcttattccaaaaaattgcgta
gaacctttaatccaaagcttatcatcagatgcagaaaaggtcgaagagacaactttcgaa
aaacgttag
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