Culicoides brevitarsis: 134838170
Help
Entry
134838170 CDS
T10947
Name
(RefSeq) FACT complex subunit Ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbri03000
]
134838170
03036 Chromosome and associated proteins [BR:
cbri03036
]
134838170
Transcription factors [BR:
cbri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
134838170
Chromosome and associated proteins [BR:
cbri03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
134838170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
134838170
NCBI-ProteinID:
XP_063709713
LinkDB
All DBs
Position
1:complement(11873477..11875970)
Genome browser
AA seq
689 aa
AA seq
DB search
MDFLEYSSINAESKGSMSSGRIKMTDQNIVFKHDKTGKVEQLNAGDIELVNYMKTVGSYG
IRVFMKNGALHRFFGFKDDEQKIADFFKKNYKLDMLEKELSYRGWNWGTAAFNGSVLSFN
IEKKTAFEIPLSNVSQCQTGKNEVTLEFHQNDDAPVGLMEMRFHIPTSETAESDPVEGFY
NNVMDQASVISVSGDAIAIFREIHCLTPRGRYDIKVFQSFFQLHGKTFDYKIPISTVLRL
FLLPHKDNRQMFFVISLDPPIKQGQTRYHFLVLLFNMEDETSIELPFTEEELKDKYENKL
EKELSGPVYEVLGKIMKVIVNRKLTGPGNFIGHSGTPAVGCSYKAAAGYLYPLERGFIYV
HKPPIHIRFEEIASVNFARSGGSTRSFDFEIELKSGNVYTFSSIEKEEYGKLYDFISSKK
LAIKNTGKNDKQSYRDDFGDSDAENEHDAYLEKVKAEAKDRDSDDGSDDDESTDEDFNPN
EAESDVAEEYDSNAQSSSSDSEGGGASDDSEKRRKKEKKQERKEKEKKRKEKSEKSSSKP
KKSKNKDSDAPKRPTTAFMLWLNESREQIKKENPGISVTEIAKKGGEMWKELKDKSKWEG
KAAKAKEEYNEAMKEYKAKGGGSSKGEGGGEKRKKEHKTPTKSPGGSGFKSKEYISDDDS
SDESEKESKKKKAKKDKSEDESESGDDSE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctcgaatactcttcgataaatgctgaatccaagggctcaatgagctcgggt
cgcatcaaaatgaccgaccaaaacatcgtcttcaagcacgacaagaccgggaaagtcgag
caactcaatgccggcgacattgaactcgtgaattacatgaagactgtcggttcgtatggc
atccgggtgtttatgaagaacggagcgttgcatcgtttcttcggtttcaaagacgacgag
caaaaaatcgcggatttcttcaagaaaaactacaagcttgacatgcttgagaaggaatta
tcgtatcgcggatggaattggggcacggcggcgttcaatggatctgtcttgagtttcaac
attgagaagaaaacggcttttgagatccccctgagcaacgtttcgcaatgtcagacgggc
aaaaatgaggttactttggaatttcatcaaaacgacgatgccccggttggattaatggag
atgcgtttccacattccgacgtcggaaacagcagaatctgatcctgtggaaggtttttac
aacaacgttatggatcaagcgtcggttatttcggtttcgggcgatgctattgccattttc
cgggagattcattgtcttacgccacgtggtcgttacgatatcaaagtattccagtcattt
ttccagttgcacggaaagacattcgattacaaaatccccatttcaaccgttcttcgtctc
tttttgctcccgcacaaggataatcgacaaatgtttttcgtcatttcgcttgatccgcca
atcaaacaaggtcaaactcgttatcatttccttgttttgctgttcaacatggaagatgag
accagcatcgagttaccattcacggaggaagagttgaaggacaagtacgagaataagctc
gaaaaggagttaagtggtcccgtttacgaagttttgggaaaaatcatgaaagttatcgtc
aatcggaaactcacagggcccggaaacttcattgggcattcaggcacgcccgcagttggt
tgctcatacaaagcagctgccggctatttgtatcccttggaacgtggcttcatctacgtg
cacaaacctccgattcacatccgtttcgaggaaattgcttcggtgaatttcgctcgtagc
ggcggctcaacacgcagtttcgacttcgaaatcgagctaaaatccggaaatgtttacact
tttagcagtattgagaaggaagaatacggaaaactttatgatttcatctcgtcgaagaag
ttggcgatcaaaaacaccggcaaaaacgacaaacaatcgtatcgcgacgactttggcgac
agcgatgccgaaaacgagcacgacgcctacttggaaaaggtcaaagctgaagcgaaagat
cgtgatagcgatgatggcagtgacgatgatgagtccacagatgaagatttcaaccccaac
gaggcagaaagtgacgttgctgaagaatacgacagcaatgcgcaatccagcagttccgat
tctgaagggggcggtgcctcggatgacagcgaaaagcgtcgcaagaaggaaaagaagcag
gaacgcaaggaaaaggagaagaaacgcaaggaaaaatccgaaaagagcagttcgaaaccg
aaaaaatcgaaaaataaagacagcgatgccccgaaacgcccgacaacggcattcatgttg
tggctgaacgagtcgcgcgaacaaattaagaaggaaaatccgggaatttcggttacggaa
atcgccaagaagggcggcgagatgtggaaagagctgaaagacaagtcgaaatgggaagga
aaagcggcgaaagcaaaggaagagtacaacgaagcgatgaaggagtacaaagcaaagggc
ggcggttcgagcaagggtgaaggaggaggtgaaaaacgcaagaaggaacataagacaccg
acgaaatctcccggaggctctggatttaagagcaaagagtacatttcggatgatgacagc
agcgacgagagtgaaaaggagtcgaaaaagaagaaggcgaagaaagacaagtctgaggat
gagtctgagtctggcgacgatagcgaatag
DBGET
integrated database retrieval system