Culicoides brevitarsis: 134838221
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Entry
134838221 CDS
T10947
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
cbri Culicoides brevitarsis
Brite
KEGG Orthology (KO) [BR:
cbri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbri03009
]
134838221
Enzymes [BR:
cbri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134838221
Ribosome biogenesis [BR:
cbri03009
]
Eukaryotic type
Pre-60S particles
Helicases
134838221
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
SAM_EPH
Motif
Other DBs
NCBI-GeneID:
134838221
NCBI-ProteinID:
XP_063709775
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All DBs
Position
1:26145926..26147908
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AA seq
603 aa
AA seq
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MSKTRPKWTELDKPLNESILNVLKRLQFKRATPVQAATIPLLLSCKDVATEAVTGSGKTL
AFLIPMLELLLKRDTPWKKSEVGAIVISPTRELATQTSSVLDEFLKEEKLSHFTQRLLVG
GNSVEEDVNIIKRKGAQILICTPGRMQDLLERKCDLNMPGRVKSLELLVLDEADRLLDLG
FEATLNTIFSYLPRQRRTGLFSATQTKEVADLMRAGLRNPVLVCVKEKAAQSTPKLLQNY
FAIVEPEEKLKYLLQFIKANDIQKSLLFLPTCACVEYWGLVLPHLLAAQGQTIKVFALHG
KMKQRRGKILQKFRDTENAMLLCTDVLARGVDIPEIDWVLQWDPPSSAAAFVHRVGRTAR
QGNEGNALILLLPSEDAYTTFLEKNQKVKLIPASIEFDPQQEINKIIHDLQLKDRSIIDK
GTRAFVSHIRAYSKHECNLILRLKDLDLGKIATSYGMLKLPKMPEMKEEFQETFVSPFKD
LDLNTLQYKDKQKQASYDKKLEIYQETGEWPGKKIHKKKTVAWDKAKKERIDKKELKKRR
KDARNLKKEKKAADEAPKKKRKNKFTEEEIEELKRDIASIKKFKKQKISQAELDEEMGFS
GDE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaactcgtccaaaatggacagaattggataaaccactgaacgaatcaatacta
aatgtattgaaacgtcttcaattcaaacgagcgacgccagttcaggcagcaacaattcct
ctgttactttcgtgcaaagatgtagcaacagaagctgtgactggttcaggaaagacctta
gcctttttaattcccatgctggaactcctgttaaaacgcgatactccatggaagaagagt
gaagttggtgccattgtcatttctccaacgcgtgaacttgcaacacaaactagctccgtt
ctcgatgaattcctaaaggaagaaaaactgtcgcatttcacccaaagactcctcgtaggc
ggtaacagcgtcgaagaagacgtaaatatcatcaaacgaaaaggcgcccaaattttaatt
tgcactccgggacgaatgcaagaccttttagagcgaaaatgtgacttgaatatgccagga
cgagtcaaatctttggaattattggtccttgacgaggcagatcgcttgttagacttgggc
tttgaggcaacactcaacacaattttcagttatttgccacgccagcgacgaacaggactt
ttttcggcaacgcaaacgaaggaagtggcagatctcatgagagcgggtctccgaaatccg
gtgttggtatgtgtgaaagaaaaggcggctcaaagtacgccaaaattgctgcagaattat
ttcgcgatcgttgagccggaagagaaactaaaatatttgctgcaattcatcaaagcgaac
gacatccaaaaatcccttttgttcctgccgacatgtgcctgcgtcgaatactggggtctc
gtgctgccacatctactcgcggcacagggacaaacgatcaaagttttcgcgttgcatggc
aagatgaaacaacgtcggggaaaaatcttacagaaattccgcgacacggaaaatgcaatg
ttgctttgcacggatgtcctggcacgtggcgtcgatattcccgaaattgattgggtgctg
caatgggatccgccatcgagtgcagctgcttttgtgcatcgcgttggacgaacagcgaga
caaggcaacgaaggaaatgccttaatattgcttttaccatcggaagatgcttacacgacg
tttttggagaagaatcaaaaggtgaaactgataccggccagtatcgaattcgatccgcaa
caagaaataaataaaataattcacgatttgcaactgaaagatcgaagtatcatcgataag
ggaacacgagcattcgtttcgcacattcgcgcgtattccaaacacgagtgtaatttaatt
ttgcgtctcaaagacttggatttggggaaaatagcaacaagttacgggatgttaaagtta
cctaagatgcccgaaatgaaagaagagttccaagaaacgttcgtaagtccattcaaagac
ctggatttaaacactttacaatacaaagacaagcagaaacaagcatcgtatgacaaaaag
ttggaaatttatcaagaaacgggagaatggccgggcaagaaaattcacaaaaagaagact
gttgcatgggacaaggcgaaaaaggagcgaatagacaaaaaggaattgaaaaaacgaaga
aaagacgcgagaaatttgaaaaaagaaaagaaagctgccgacgaagctcccaaaaagaaa
cgaaaaaacaaatttactgaagaggaaattgaggaactgaaacgagacatcgcaagtatc
aaaaaattcaagaaacaaaagataagtcaagcggagttagatgaagaaatgggcttcagt
ggtgatgaataa
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