Coenobita brevimanus (land hermit crab): 145396456
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Entry
145396456 CDS
T11894
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cbrm Coenobita brevimanus (land hermit crab)
Pathway
cbrm03018
RNA degradation
cbrm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbrm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
145396456
09123 Folding, sorting and degradation
03018 RNA degradation
145396456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrm03019
]
145396456
03041 Spliceosome [BR:
cbrm03041
]
145396456
Messenger RNA biogenesis [BR:
cbrm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
145396456
mRNA degradation factors
5'-3' decay
Lsm complex
145396456
Spliceosome [BR:
cbrm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
145396456
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Arc
UCP028583
Motif
Other DBs
NCBI-GeneID:
145396456
NCBI-ProteinID:
XP_080125957
LinkDB
All DBs
Position
38:complement(49660315..49667558)
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGNLVSCDNWMNINLKDVICTSRDGDKFWRMPECY
IRGSTIKYLRLPDEVIDLVKEEVVARGRGRGESRGRGGPGRGRGGPGRGFGGRGRGGGPG
GGRGGPGRGGMKKKEGFK
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgctgccattatcacttctcaagactgcccagaaccacccaatgttggtggagttgaag
aatggtgagacttacaacggcaacctagtttcctgtgacaattggatgaacatcaaccta
aaggacgttatctgtacatccagggatggtgacaaattctggagaatgcctgagtgttac
atacgcgggtcaaccatcaagtacctgcgactccctgatgaggtgattgatctagtgaag
gaggaggtggtggcacgaggacgaggtcgtggtgagagccgaggtcgtggaggaccaggc
aggggtcgaggaggccctggtagaggatttggtggacgtggtagaggcggtggaccagga
ggaggccgaggtggaccagggcgaggtggcatgaagaagaaggaagggtttaagtag
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