Coenobita brevimanus (land hermit crab): 145396878
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Entry
145396878 CDS
T11894
Symbol
Spt6
Name
(RefSeq) transcription elongation factor Spt6
KO
K11292
transcription elongation factor SPT6
Organism
cbrm Coenobita brevimanus (land hermit crab)
Brite
KEGG Orthology (KO) [BR:
cbrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbrm03021
]
145396878 (Spt6)
03036 Chromosome and associated proteins [BR:
cbrm03036
]
145396878 (Spt6)
Transcription machinery [BR:
cbrm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
145396878 (Spt6)
Chromosome and associated proteins [BR:
cbrm03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
145396878 (Spt6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
HHH_9
Spt6_S1
HHH_3
S1
Tex_N
Tex_YqgF
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
145396878
NCBI-ProteinID:
XP_080126290
LinkDB
All DBs
Position
39:27525009..27571833
Genome browser
AA seq
1987 aa
AA seq
DB search
MSHFIDSEAEESEEEEEEYAESEKKKLKKLTTTVEDSSEEEEEDDEEKIREENKGFINDD
EEEEGSGSDSEIEGKRKRKDEDDDDDLEEDDLEEDDLALIEENIGVKLDRKKKFKRLKRI
EDEDSDANEDDVQGQIRKEIFMGSGDEEEDESGQAPVHQQPETYASEEEEEESDGEGSFI
VDDEGKPIAKQKKKAVFDDEGLEAARDIFGCDFDYGEFEQYEDWEEGEEEEEEEDDYEED
EEGDGRDRRGRKERRKQVKKSIYEVFEPSELERGHLTDQDHEIRKLDIPERFQLRQIPVT
RTRGEGDDRTTDKELDQEAKWIYHHAFFRPFISNQEGRDEARQRSRRDINMIQKIYNALD
LMRNSTCEVPFIAFYRKEEVQPELNIHDLWKVYHWDEKWCQLKARKENLRARFQMMGEYQ
GDFIMRDLDAPLPENMRTLKEEDIERIEEIETSEQFNDYYKHFLLYYGKDQPAMREHMKA
KRKEQRPPTRVTRVVKVMRKVKRKKKKKKRNTGIIDDDDDSDDNEGNKENEPEEMETERD
KEKDTEAQKENDTEKEREAEKEKDAGSEKDSDAESDKEKETESDKEHDSEAEKEKEVGSN
KESDAEVEKEKEAEVETQKDGETEKENHIEAEESNKSPSSPEKERGNEEGEDTNRGNEEE
DTGMDIQDGGDDRDDEDGEVTEKEKEQEVEKEKEKEKEKDDEDDDDDDDDDDSESEVEME
VETEVEEEVEEEEQEVEEDSEALKKAVRRHEYELLRRAGIEGLTKKFGLTPEQFGENLRD
NYQRFDVEQCPEDPRKEAEEYLSKMCPTAERVLEAAVRMVGWQLACEPLVRRTVREVYFE
RARISCRPTPQGLKIIDEHHPLYAMKYLKDKPVTDLQGDQFLRLKCGVEDKFMTISLSDT
VEGNTTTSFLDEMKQLYYRDEFSQVVQDWNDLRGRAVTFAFKRIMEDLKRELSQRLLQEA
KDHVMEQCCSKLYNWIKIAPYNPGDFSDEDVDDWDTSRGFRVFSVSFVPDLSQAAFGCCI
DIDGDCCEYIRLPHLLKRRNAYNERDAMAKENDIRRMQDFIYRRKPHMVAVSGESRQALM
VKEDLIQILKDLEEQEQFPKINVEVIESNLSAVYAMSKKGEADFLDYPPLLRQAISVGRR
VQDPLVEFSQLCNTDEELLNIKFHTLQDQLNPTELLNSLYIEFVNRTNEVGVDLNRAVAY
PYTQNLVQFICGLGPRKANLLIKNMKQNNQRLENRNQLVVNFHMGPKVFINCAGFIKIDT
NALGDSDNYIEVLDSTRIHPEAYDWARKMAVDALEYEDEEGKPAEALEEILETPERLSEL
DLEAFATELQNQGFGKKSTTLYDIRHELNHRYKDFRLPFRSPTPEEVFNILTHESPETFY
VGKLVQVSVTNFIHRKPRGDQLDNANPVRNEDTGLWQCPFCLKNDFPELSEVWSHFDAGD
CPGQAIGIRVRLDNGISGFIGIKNLSDKTVTNPAERVRRDGLVLCRIMKIDPEKFSVELT
SRTSDLQDRDNKWKPPKDPYYDYEAEEKDMNIDKKKKEKKKTQYQKRVIAHPSFRNIDYN
EAEKVMQHLEQGEVIIRPSSKGNDHLTATWKVTEGICQHIDIQEQDKQNDFSLGQKLWIG
SEEFEDLDEIIARYITPMANNVRQILEYKYYKESIMGNKDKAAEYLKDEKKKNPKTIPYI
FSPSKELPGKFILSYLPRTKVIHEYVTVNPEGFKFRQRMQHPNLAALLKWFKQNFRRAVP
GATPGMMSTRTPYMGGNTPNLIGVDASTIQKVAQNLNPHMLHNLSQAATNTPYGAHTPGA
YSQGYSNYANTPYTPSGQTPFMTPYATPGPSTTPRYGGSQTPLYGSSGNRTPSHRQSSGH
MNQTPRSIPTVTGRTEQMDWKLAAAAWVQAKGGTTGHDVGRSTPRHHDAGRTTPRYSDSR
DTRYAVSPRYSDDGSRRTPRYDDRTPRPYHDYDNPRATPRSARSTPKTIHSPANMSIGGD
QTPLYDE
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacttcattgactctgaagctgaggaaagtgaagaggaggaggaggagtatgct
gaatctgaaaagaaaaagttgaagaagctaacaactacggtagaggattcctcagaggag
gaggaggaggatgatgaggaaaagatccgtgaagagaacaaaggcttcatcaatgatgac
gaggaagaggaggggtcagggtcagacagtgagatagaagggaagagaaaacgaaaagat
gaagatgatgatgatgaccttgaagaggatgatctggaggaggatgacctggcactgatt
gaagagaacattggtgtgaaacttgatagaaagaaaaagttcaagcgtctgaagcgaata
gaagatgaagattctgatgccaatgaagacgatgtgcagggacagattaggaaggagatc
ttcatgggatcaggtgatgaggaggaggatgagtcaggccaagctccagtgcaccagcag
ccagagacctatgcgtcggaggaagaggaggaggagtccgatggggagggtagctttatt
gtggacgatgaaggaaagcccattgccaagcagaagaagaaggccgtgtttgatgatgaa
ggactggaggctgccagggatatcttcggctgtgactttgactatggggaatttgaacaa
tatgaagattgggaagaaggagaggaagaggaggaagaagaagatgattatgaggaggat
gaagaaggagatgggagagatcgacgagggaggaaggaacgcagaaagcaagttaaaaag
tctatctatgaggtatttgagccaagtgagctggaacgtggccacctgacagaccaggac
catgagattcgtaagctggacattcctgagagattccagctgcgacagattccagtgaca
cgcacccgaggcgaaggtgacgaccgcaccacggataaagagcttgaccaggaagccaag
tggatatatcaccatgctttcttcagaccattcatctcaaatcaggaaggtcgtgatgag
gcccgccagcgctcccgccgtgacatcaacatgatacagaagatatacaatgcactggac
ctcatgagaaactccacatgtgaggttccattcatagccttctacaggaaagaagaggtc
cagcctgagttgaacatccatgacctttggaaagtttatcactgggatgaaaaatggtgt
cagctgaaggctcgcaaggagaatcttcgtgccaggttccaaatgatgggagagtaccag
ggtgacttcatcatgcgggatcttgatgcaccactcccggaaaacatgcgcacgctcaag
gaagaggatatcgagaggattgaggagattgagacctcagagcaatttaatgactactac
aagcacttccttctgtactatgggaaggaccagccagccatgagggagcacatgaaagct
aaacgcaaggagcagcgcccacccaccagagtcaccagggtagtcaaggtaatgaggaag
gtgaagcggaagaagaagaagaaaaaaaggaacactggtataattgatgatgacgatgac
agtgatgacaacgaaggaaacaaggagaatgagccggaagaaatggagacggagagagac
aaggagaaagacacagaggcacaaaaagaaaatgatacagagaaggagagagaagcagag
aaggagaaagatgcaggaagtgagaaagattcagatgcagaaagtgacaaagaaaaagaa
acagagagtgacaaagaacatgattctgaggctgagaaagagaaagaagtaggaagtaac
aaagaatcagatgctgaggttgagaaagaaaaagaagctgaggtagagacacagaaagat
ggagaaacagagaaggagaaccacatagaagctgaggaaagcaacaagagccccagcagc
ccagaaaaagagagaggtaatgaagagggcgaagacaccaatagaggtaatgaagaggaa
gatactggtatggatattcaagacggaggagatgacagggatgatgaagatggagaagtg
actgagaaagaaaaggaacaggaggtggagaaagaaaaggagaaggaaaaggaaaaggat
gatgaagatgatgatgacgatgatgatgatgacgactcagagtcggaagtggagatggag
gtggagacagaggtggaggaggaagtagaagaggaggagcaggaagtggaggaggattca
gaagcattgaagaaagcagtgcgaagacatgaatatgaattgctgcggagagctggaata
gagggacttaccaagaagtttggtttgactcctgagcagtttggtgagaatcttcgtgac
aactatcagcgttttgacgttgaacagtgtccagaagacccgaggaaggaggctgaagaa
tacctttccaaaatgtgtccaactgcagaacgtgtgttggaggctgcagtgaggatggtt
gggtggcagctggcctgtgagccgctggtgaggcgaacagtgcgcgaggtgtactttgag
cgagccaggatcagttgcaggccgacccctcagggactgaagatcattgatgaacaccac
ccactgtatgccatgaaatacctcaaggacaaacccgtcacagatctccagggggaccag
ttcttgcgcctcaagtgtggtgtggaggacaagttcatgaccataagcttatctgacaca
gttgaaggcaataccaccactagttttttggatgagatgaagcagttgtattacagggat
gaattttcacaagttgtgcaagattggaatgacctgagaggacgagctgttacttttgcc
ttcaaacgtatcatggaagacctgaaaagggaattatctcagcggttacttcaagaagcc
aaggatcatgtaatggagcaatgttgcagcaaattatataactggattaaaattgctcct
tacaaccctggagatttcagtgatgaagatgtagatgactgggatacttccagaggcttc
agagtgttttcagtttcatttgtgcctgatctgtctcaggctgcatttggttgttgtatt
gatattgatggtgattgctgtgaatacatccgcctccctcacttgctcaagagacgcaat
gcttataatgaacgagatgccatggctaaagagaatgacatcaggcgaatgcaagatttt
atttatcgtcgcaaacctcacatggttgcagtaagtggtgagagtcgtcaagctttgatg
gtcaaagaggaccttatccagatcctgaaagacctggaggaacaagagcagtttccaaaa
atcaatgttgaagtaattgaaagcaacctttccgccgtttatgcaatgtctaagaaagga
gaagcagactttcttgactaccctcctctgctgcgtcaagccatttcagttgggaggcgt
gtacaggacccactcgttgagttctcacaattatgtaatacagatgaggaattgctcaat
ataaaattccacactttacaagaccagttgaatcctacagagttgcttaactcactgtat
attgaatttgtcaacaggacaaatgaagttggggtagacctcaacagagctgttgcttac
ccatacacacagaacttggttcagttcatttgtggcttggggccaagaaaggcaaacctc
ttgattaagaacatgaaacagaataatcagcgtcttgaaaacaggaatcagttggtagtc
aacttccacatgggtcctaaagtttttatcaactgtgctgggtttatcaagattgataca
aatgctttaggtgacagtgataactatattgaagtcttagactcaacgagaattcacccc
gaggcctatgactgggctcggaagatggctgtagatgccctcgagtatgaggatgaagaa
ggcaaaccagctgaggccttggaagagatcttagaaacaccagaacgacttagtgaactg
gatcttgaggcttttgctactgaattacaaaaccaaggttttgggaagaagagcaccacc
ctgtatgatattagacatgagctaaaccacagatataaagatttcagattaccattcaga
tcaccaacaccagaagaggtctttaatatactaactcacgaatcccctgaaactttttat
gttggtaagcttgtccaggtgtcagtcacaaatttcattcaccgtaagccacgtggtgac
cagcttgataatgccaatcctgtcaggaatgaagacacaggcctctggcagtgtcccttt
tgtctcaagaatgattttccagaactcagtgaagtgtggagtcattttgatgctggggat
tgtcctggccaggccattggcattagagtgcgactggataatgggatatctgggtttatt
ggtattaaaaatttatcagataagacagtcacaaatccagcagaaagagtcaggagagac
ggcctcgttttatgtcgaatcatgaaaattgatcctgaaaagttctctgtggagctcaca
tcgagaacatcagatttgcaggaccgagacaacaagtggaaacctcctaaagatccatac
tacgattatgaagctgaggagaaagacatgaacattgacaaaaagaagaaggagaaaaag
aaaacccagtaccaaaagagagtgattgctcatccttcattcaggaacattgattataat
gaggcagagaaggtgatgcagcatttagagcagggagaagtaatcatcagaccatctagt
aaaggaaatgatcacctgactgccacatggaaggtcacggagggaatttgtcagcacata
gatatacaggaacaggacaagcagaatgatttctcacttggccagaaactgtggattggg
agtgaagagtttgaagatttggatgaaattattgcaagatacatcacacccatggcaaat
aatgtacggcaaatattagaatataaatattacaaggagtcaatcatgggtaataaagat
aaagccgctgagtatctgaaggatgaaaaaaagaagaatcctaagacaataccttatata
ttctcaccgagtaaagaattacctggcaagttcattctgtcgtatctcccaaggactaag
gtaatccacgaatatgtgacagtcaatcctgaaggctttaaattccgtcaaagaatgcag
catccaaatttggctgcgttactgaagtggttcaagcagaacttccggcgagcagtacca
ggtgccacaccaggcatgatgtccacacgcacaccatacatgggtggcaatacaccaaac
ctcataggtgttgatgcctccaccatccagaaggtggcacagaacctaaaccctcatatg
cttcacaacttgtcccaagcagccaccaacacaccttatggggcacacactccgggggca
tactctcaagggtactcaaactatgccaatactccttacaccccatcaggccagactccc
ttcatgaccccctatgccacccctggaccctcaacaacacctcggtatggcggctcccag
acgcccctgtatggcagctccggaaaccgaacaccatcccaccgtcagtcttcaggacac
atgaaccagacaccaaggtccatccccacggtaaccggacgcacagaacagatggactgg
aagttggcggctgctgcgtgggtacaggccaagggtggcactaccggacacgatgtgggt
agatctacaccaagacaccatgacgcaggtcgcaccaccccgcggtattcggactcccgg
gacacgcgttatgccgtcagccccaggtattctgacgatggatcacgccgcaccccacgc
tacgacgaccgaaccccccgcccctaccatgactacgacaaccctcgtgccactccacgc
tccgctcgttccacccccaaaaccatccactccccagccaacatgagcattggaggagac
cagacaccactttatgacgagtga
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