Coenobita brevimanus (land hermit crab): 145403745
Help
Entry
145403745 CDS
T11894
Name
(RefSeq) uncharacterized protein LOC145403745
KO
K19719
collagen type II alpha
Organism
cbrm Coenobita brevimanus (land hermit crab)
Pathway
cbrm04512
ECM-receptor interaction
cbrm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cbrm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
145403745
04518 Integrin signaling
145403745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cbrm00536
]
145403745
Glycosaminoglycan binding proteins [BR:
cbrm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
145403745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
New_glue
Motif
Other DBs
NCBI-GeneID:
145403745
NCBI-ProteinID:
XP_080131549
LinkDB
All DBs
Position
61:35062926..35122857
Genome browser
AA seq
1559 aa
AA seq
DB search
MGWTAPPGRRPPHPPTHIFLALCFAFALALPWAVAEPEPDPDPKPRPQEGDYYGPYEDYD
DEYYPYEDGYDYNYNEEDQYPPYDPYATEAPYDPYRPYTEAPYDPYDYTEPPTTTTSTTT
TTTTTTPPPPPTTTTTTTTTTPRPPPPPRRPDVSFERRPTADRRPGGRRPQGGRAQIGRG
REGARRVTEEPPPEIVGPTSPEVGVGPTITGEEGPSGPPGKQGPTGVPGIPGIPGDPGPP
GPMPDITPWLSQLAVSQGGEKGPQPDPFSYLQAQVGPVGPRGSPGPPGPPGPQGFQGMRG
EPGDPGSVGPSGPPGPRGMPGIPGKDGENGDDGVSGPPGAVGPPGPRGLPGMPGLPGVKG
HRGFPGLDGAKGEQGQMGDKGASGPSGPVGPVGPMGSAGPRGERGREGPPGPPGLRGIDG
IAGPPGPHGPPGKPGPPGFPGSAGAKGDQGAQGSKGSQGLQGPRGEAGKPGSPGERGPQG
GSGKDGLAGEKGAPGTQGDSGPPGFPGARGPPGLPGSPGLPGNKGERGLAGERGFKGEFG
MKGEGGNPGPRGLPGAPGSSGKRGKRGMRGPPGGVGPQGERGPTGGRGLPGADGPPGPKG
QGGDPGPPGGAGTKGREGNPGPPGLPGRQGLRGPTGLSGPSGKTGRPGDRGPPGADGKTG
DQGPQGIQGLPGPMGPPGLGGPIGQPGKDGAPGESGPSGPRGDPGKDGLQGPGGVPGPQG
GSGERGPPGPPGARGFQGLPGAPGIAGANGKDGEAGLQGPRGLPGGVGLRGQRGFPGERG
AQGPPGESGKRGESGLPGPDGPSGPSGPPGPKGHSGPSGLVGLPGGRGLPGLPGEKGERG
SMGIVGPEGPPGRQGDQGPQGVMGPVGPQGEPAEKGDPGPPGPPGEQGANGMIGERGPQG
ELGLQGFPGPIGAPGLAGPKGQRGLPGQKGGQGNTGLMGPPGETGPQGLVGLTGAKGQRG
SSGQRGEPGLMGPPGRPGNAGSPGNPGDQGQPGRAGNPGIKGSSGDTGRPGLPGPSGQAG
APGPEGPKGEAGPQGRPGPLGQPGPAGPGGERGLPGLPGPPGPTGVQGKRGARGEPGVEG
KRGEEGPIGPPGLAGAIGPIGPTGDTGAPGADGKPGPPGISGRTGDKGPSGPPGNQGAPG
PSGLPGPPGPAGPIGLTGERGERGEIGPQGVEGSSGPRGKPGAPGMQGEKGETGAVGPKG
AKGHRGLIGLQGLPGPMGPSGDKGMPGVAGPPGPAGEPGPKGPPGRDGGPGLQGIMGPPG
PRGPAGETGGSGLPGPPGPPGPAGPPGESMGYDATALAVLLSQGQTKGPDPLQGDDSDLP
ARLFGQEITNEERRDLITKAYEQLKVSYRKFMRPEGTKDSPAKTCRDLSYTHPELPSGEY
WVDPNEGDIQDAIVVHCDMTTKATCVLPQPGLTQEFTWQGQSRGIVWLGEDIQPDFEFTY
KADSNQLRFLQLLSSEASQHLTYHCKKSVAVFDATKRNLRRAMQIMTAADIELKARGNRK
LKYRVIEDGCKTRSSSWATTKVEYRTNKPQRLPFVDVGLRDIGRPDQAFKLEIGPVCFL
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggggtggaccgcgccccccggcaggcgccctccccacccacccacacacatcttcctt
gccctctgcttcgccttcgcccttgctctaccatgggccgtagcagagcctgagcctgac
cctgacccgaagcccaggccacaggagggggactactacggaccctatgaggactatgac
gatgagtactacccctatgaggacggttacgattacaactacaacgaagaagatcagtac
cctccctatgacccttacgccacggaggctccctacgatccttaccgtccttacactgag
gctccttacgacccctacgactacaccgaaccccccactaccaccacctctaccaccacc
acaactaccactactacccctccccctccacccactaccacaaccaccacaaccaccacc
acaccacgaccaccacccccgcctcggcgacctgatgtgtcgttcgagaggcgacccacg
gcagatcgacgacccggaggcaggaggccccagggagggcgtgctcagattggtcgtggc
agagagggtgcaagacgggtcacagaggaaccaccgccagagatagttggaccgacatcc
cctgaagttggcgtcgggcccacgatcacaggggaggagggaccgtcagggcctcccggg
aagcagggacctacaggtgttccaggcatcccaggcatcccaggcgacccaggaccacca
ggacccatgccagacatcacgccatggctatcccagctggcagtgtcccagggcggagag
aagggcccccagcctgaccccttcagctacctacaggcccaggttgggcccgtgggtccc
cgaggatctccaggtcccccaggtccaccaggtccacaaggcttccagggtatgcgagga
gagccaggtgacccaggttctgttggcccttcaggaccacccggcccccgtggcatgcct
ggaatccccggcaaggatggtgaaaatggtgacgatggcgtaagtggtccacccggtgca
gtgggtccacccggtccacgtgggcttcccggtatgcccggccttcccggtgtgaaggga
cacagaggcttccctggtctagatggcgccaagggtgaacagggacagatgggagataaa
ggtgcttctggaccatctggaccagttggaccagttggaccaatgggctcagcaggtcct
cggggtgaacgcggtagagagggccctccaggtcccccaggtctaagaggtattgatggc
attgctggcccacctggtccccacggcccccctggaaagcccgggcctcctggcttcccc
ggcagtgctggcgccaaaggtgaccagggtgctcagggttcaaagggttcccaggggctt
cagggtcctcgaggcgaggcagggaaaccaggcagtccaggtgagcgaggtccccagggt
ggttccggtaaggatggcctcgctggtgagaagggcgctccaggtacacagggagattcc
gggccccctggatttccaggtgcacgaggacccccaggactcccaggcagcccaggactt
ccaggcaacaaaggagaaaggggtttggcgggggagcgtggtttcaagggagagtttggc
atgaaaggtgagggtggcaatcctgggcctcgaggtcttcctggagcacctggttcctcc
ggtaagcgaggcaaaagagggatgcgagggcccccaggtggtgtgggcccccagggtgaa
cgtggtcccactggcggtcgaggacttccaggagctgatggacccccgggacccaaaggt
cagggcggagatcctggacctccaggtggggcagggaccaagggacgtgaaggaaaccca
ggacccccaggccttcccggtcgacagggtctcaggggccccactggtctttcgggccct
tctggaaaaactgggaggccaggagatcgaggaccacctggagctgatggtaaaaccgga
gaccagggaccccaaggcattcaggggctcccaggacccatgggaccaccaggacttggt
ggaccaatcggccagccaggaaaggatggtgcccctggtgaaagtggtcccagtggccct
cgcggtgacccagggaaggatggattgcagggccctggaggagtcccaggaccccaaggc
ggctcaggtgaacgaggtcctccaggccctcccggtgctcgtggcttccagggtctgcct
ggcgcccctggtatcgctggtgccaatggcaaggatggtgaggctggtctgcaaggtcct
cgtggcttgcctggtggcgtggggctccgtggccagcgtggcttcccaggagagcgaggt
gctcaggggcctccaggagagtctggcaagcgtggagaatccggtctgcctggtccagat
ggtccttcagggccttctgggccaccgggaccaaaaggtcactctggtccatcaggcttg
gtgggtcttcctggaggtcgtggactccctggactgccaggagagaagggagagcgaggt
tctatggggattgttgggcctgaaggaccccctggtcgccagggtgaccagggcccacaa
ggtgtgatgggtcccgttgggccccaaggtgaaccagcggaaaagggtgatccaggtcca
ccaggtcctcctggagaacaaggggccaatggcatgattggagaacgaggcccacagggt
gaactgggtctgcaaggcttccctggtcctattggagctccaggactggcagggcctaag
ggacagcgcggcttgcctggtcagaagggtggacaaggtaataccggtctgatgggtcct
ccaggggagactggtccccaaggattggttggtctgactggagctaaaggtcaacgaggc
agctctggccagcgaggagaacctggcctaatgggtccaccaggacggcctggtaatgct
gggtcacctggaaaccctggagatcaaggacaacctggtcgggcaggtaacccgggaatt
aagggttcctctggagacactggtcgtcctggtcttcctggaccatctggtcaagctggt
gcacctggaccagagggaccaaaaggtgaagctggccctcaggggcgtcctggcccactg
ggtcaacctggccctgcaggaccaggaggggagagaggacttcccggcctgcctggtcct
cctggcccaaccggagtccaaggaaaacgaggagcacgaggagaacctggtgtggagggc
aaacgaggagaggagggtcccattggtccccctggtctggctggtgctatcggccccatc
ggtcccacaggtgacacaggtgctcctggagctgacggcaaacctggacctcccggtata
tcaggacgcacgggagacaagggtccatctggccccccaggaaaccagggtgcccctgga
ccatcgggactgcctggccctcctggtccggcaggaccaattggcttgactggcgaacgt
ggagaacgaggtgagattgggccacagggtgtggaaggatcttctggtccccgtggcaag
cctggtgctccaggaatgcagggggagaaaggcgagactggtgcagtaggacccaagggt
gccaaaggacacagaggactaattggtctacagggtttgccaggtcccatgggtccttct
ggagacaagggaatgccaggtgtagccggcccccctggtcctgctggtgaaccagggcca
aaaggtcctcctggtcgtgatggaggaccaggtttacaaggtattatgggacccccaggt
ccccgtggtcccgctggtgaaactggtgggtctggcctaccaggtccacccggtcctcca
ggtccagctggtcctcctggtgagtcaatgggctatgatgcaacggctctggcggtgttg
ttgagccaaggacagaccaaagggcccgacccactgcagggtgacgactccgacctccca
gccaggttgtttggccaggagatcacaaatgaggagcgcagagatctcattaccaaagct
tatgagcagctcaaagtgtcctacaggaagttcatgcgtcctgagggtaccaaggactcc
ccagccaagacctgccgtgacctatcctatacacacccagagctgcccagtggggaatac
tgggtggacccgaacgaaggagacattcaggacgcaatcgtggttcactgtgacatgacc
accaaagccacttgtgtcctgccccagcctggcctcacacaggagtttacatggcaggga
cagtctagaggcattgtgtggcttggtgaggacatccaacctgactttgagttcacatac
aaagccgacagtaatcaactcaggttcctacaactcctttcctccgaggcctctcagcat
ttgacctaccactgcaaaaagtccgtggctgtgtttgatgccaccaagaggaatctgcgg
agagctatgcagatcatgactgcagctgatatagaactcaaggcgcgaggcaatagaaag
cttaagtacagggtgattgaagatggatgcaagactcggtctagcagctgggccacaacc
aaagtggagtaccgcacaaacaaacctcaacgcctgccattcgtcgatgtcggcctgagg
gacataggccgaccggatcaagcctttaaacttgagatcggcccagtctgcttcttgtaa
DBGET
integrated database retrieval system
