Coenobita brevimanus (land hermit crab): 145408294
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Entry
145408294 CDS
T11894
Symbol
RfC4
Name
(RefSeq) replication factor C subunit RfC4
KO
K10755
replication factor C subunit 2/4
Organism
cbrm Coenobita brevimanus (land hermit crab)
Pathway
cbrm03030
DNA replication
cbrm03410
Base excision repair
cbrm03420
Nucleotide excision repair
cbrm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
145408294 (RfC4)
03410 Base excision repair
145408294 (RfC4)
03420 Nucleotide excision repair
145408294 (RfC4)
03430 Mismatch repair
145408294 (RfC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbrm03032
]
145408294 (RfC4)
03036 Chromosome and associated proteins [BR:
cbrm03036
]
145408294 (RfC4)
03400 DNA repair and recombination proteins [BR:
cbrm03400
]
145408294 (RfC4)
DNA replication proteins [BR:
cbrm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
145408294 (RfC4)
DNA Replication Termination Factors
ELG1-RFC complex
145408294 (RfC4)
Chromosome and associated proteins [BR:
cbrm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
145408294 (RfC4)
DNA repair and recombination proteins [BR:
cbrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
145408294 (RfC4)
Check point factors
HRAD17(Rad24)-RFC complex
145408294 (RfC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_14
AAA_16
AAA_lid_RFC1
RCF1-5-like_lid
Rad17
Viral_helicase1
nSTAND3
Mg_chelatase
AAA_11
RuvB_N
AAA_19
AAA_18
DEAD
AAA_5
AAA_assoc_2
ABC_tran
MeaB
AAA_24
NTPase_1
MipZ
RNA_helicase
AAA_23
AAA_28
AAA_7
AAA_25
ATPase_2
FtsK_SpoIIIE
SRPRB
DNAX_ATPase_lid
PB1
Motif
Other DBs
NCBI-GeneID:
145408294
NCBI-ProteinID:
XP_080135195
LinkDB
All DBs
Position
76:12636114..12673880
Genome browser
AA seq
346 aa
AA seq
DB search
MAGTEGTMEVDTATTSGHSTSSGSKSSHIPWIEKYRPTTFPEIVGNEETVARLEVFAKQG
NVPNIIIAGPPGVGKTTTILCLARSLLGPSYKDAVMELNASNERGIDVIRNKVKMFAQQK
VTLPRGRHKIIVLDEADSMTDGAQQALRRTMELYSNTTRFALACNTSEKIIEPIQSRCAM
LRYSKLSDAQVLAKLLEVCKKEDLSYTDSGLEAVLFTAQGDMRQALNNLQSTAQGFGHIS
SENVFKICDEPHPVLVKEMIQHCVKSEFDDAYKILAHLWKLGYAAEDIISIIFRVTKNMT
MAEFLKLEFIKEAGHTHMRLVRGTSSLLQLSGLLARLCSKALTAPV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcacggaggggacgatggaggtagatacggctactacttctggccatagtact
tcttctggctcaaaatcgtcacatataccctggattgaaaagtaccgtcctaccacgttc
ccagagattgtgggtaatgaagagactgtggctcggctagaagtctttgcaaagcagggc
aatgttccgaacattataatagccggtccgccaggtgttggcaagaccacaaccatacta
tgccttgctcgttcgttattagggccaagttataaggatgctgtgatggagcttaatgcg
tccaatgagcgaggtatagatgttattcgaaacaaagtaaagatgtttgctcagcagaag
gtcacactgccccgtggccgacacaagattattgtactggatgaggcggacagcatgaca
gatggggcacagcaggctctgaggagaacaatggaactgtactctaatacaacacgcttt
gcattagcttgcaacacttctgagaagatcattgaacccatccaatctcgatgtgccatg
ctacgctattccaagctctcagacgcacaggtcttggcaaagctgttggaggtatgcaag
aaggaggaccttagttatacagactctggattggaggcagtgttgttcactgcccaagga
gatatgagacaagcactgaataaccttcagtccactgcgcagggctttgggcatatatct
tcagaaaatgttttcaagatttgtgatgaaccccatccagtgctggttaaagaaatgatt
cagcattgtgtcaagagtgagtttgatgatgcttataagattttagctcacctgtggaaa
cttggttatgcagctgaggatatcatcagtatcatctttagagtcaccaagaacatgacc
atggccgagttcctcaagttagagttcataaaggaagcaggacacactcacatgcgctta
gtaagaggtacatcctcacttcttcaactctcaggactgctggctcggctgtgctcaaag
gcacttacagctccggtctaa
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