Coenobita brevimanus (land hermit crab): 145410329
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Entry
145410329 CDS
T11894
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cbrm
Coenobita brevimanus (land hermit crab)
Brite
KEGG Orthology (KO) [BR:
cbrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrm03019
]
145410329
03041 Spliceosome [BR:
cbrm03041
]
145410329
Messenger RNA biogenesis [BR:
cbrm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
145410329
Spliceosome [BR:
cbrm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
145410329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_MUD2_C
RRM_3
Nup35_RRM_2
RRM_5
RRM_Nup35
Calcipressin
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
145410329
NCBI-ProteinID:
XP_080136588
LinkDB
All DBs
Position
85:complement(115481..1147172)
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AA seq
334 aa
AA seq
DB search
MKINWATSPGSQGKVDTSKHFHIFVGDLSPEIETHTLREAFAPFGEISDCRVVRDPHTLK
SKGYGFVSFVKKADAETAITNMNGQWIGSRNIRTNWATRKPPAPKNNDANQKPLTFDDVY
NQSSPTNCTVYCGGITNGLSEELMQKTFAHYGQIHEIRVFKDKGYAFVRFSTKESATHAI
VSVHNSEINGQPVKCSWGKESGDPNNTPVTTQVMTLTDVSECLSLQPLPGSQYPYNYAGQ
MGYWYPQGYPAQVQGQQFLGMQGFAYGQYGYQQGMAGAGMAGVPTWQGVPQPQLPTGQMP
QLQQPASMVGAYPVQQFQLSSPYLLGTTPGTLVQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaactgggccacgtccccgggctcacagggcaaagtcgacaccagcaagcac
ttccacatcttcgtaggcgatctcagcccagaaatcgagacgcacactttgagagaagca
ttcgcgccctttggagagatatctgactgtcgggtggtaagggacccccacacactcaag
tcaaagggatatggcttcgtctccttcgtgaaaaaggcggatgcggagacagccattacg
aacatgaatggtcagtggatcgggtcgcgcaatatccgtactaactgggccacacgcaaa
ccacccgcgccaaagaacaacgacgccaaccagaagcccctgaccttcgatgatgtctat
aaccagtcctcgccaacgaactgcaccgtctactgtggaggcattaccaacggcctgtct
gaggagctgatgcagaaaacttttgcgcattacggccaaattcatgagatcagggtcttc
aaggacaagggatatgcatttgtcagattctccaccaaagagtcagccacccatgccatt
gtctcagttcacaactccgagataaacggtcagccggtcaaatgctcatgggggaaggag
tctggtgaccctaacaacacccccgtcaccactcaggtcatgacgctgaccgatgtgtcc
gaatgcttgtctttgcagccgctgcccgggtcccagtacccctacaactacgcaggccag
atgggctattggtaccctcagggatacccggcccaagtccaggggcagcagttccttggt
atgcagggcttcgcttacggccagtacggataccagcaggggatggctggtgcagggatg
gcaggagtaccaacgtggcagggtgtaccccaaccgcagctgcccactggtcagatgccc
caactccagcagccagcgtccatggtgggggcctacccagtgcaacagttccagctgtcg
agcccctacctcctgggcaccactcctggcaccttggtgcagtaa
DBGET
integrated database retrieval system
