Coenobita brevimanus (land hermit crab): 145415124
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Entry
145415124 CDS
T11894
Name
(RefSeq) cytotoxic granule-associated RNA binding protein tiar-1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cbrm
Coenobita brevimanus (land hermit crab)
Brite
KEGG Orthology (KO) [BR:
cbrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrm03019
]
145415124
03041 Spliceosome [BR:
cbrm03041
]
145415124
Messenger RNA biogenesis [BR:
cbrm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
145415124
Spliceosome [BR:
cbrm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
145415124
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_5
RRM_PARP14_3
RRM_10
RRM_MUD2_C
RRM_3
RRM_Nup35
Nup35_RRM_2
RRM_ACIN1
Zn_ribbon_LysW
Motif
Other DBs
NCBI-GeneID:
145415124
NCBI-ProteinID:
XP_080140669
LinkDB
All DBs
Position
101:complement(6403632..6427216)
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AA seq
372 aa
AA seq
DB search
MAQEQNRTLYVGNLDASVTEDLIMMLFGQLGEVRSCKMFREPTTDPYCFVEFCDHMTALN
AITMMNDKVLQNRKMRVDWATGQGNKNKYTKVDTTRHHHVYVGDLSPEIDEQALREAFQV
FGEISDCKVVKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPTN
TPTENKPEQKKLNYEEIYNQTTPTNTTVFCGGLKQDISEEMLHKSFQPHGQIEKIKIFKE
KGYAFIKYTNKESACQAIVELHNSNLNGQIIRCSWGKDTGADQVNNPAQEANGAQPNMAS
FPNGGGYPNQMGQMGYWQYYPQQMSYNQMPYGQYPYGYQPNPGYMWMGWGQQGWGQPGQP
APPAPQQGQPQQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggagcagaaccggacgctgtacgtgggcaacctggacgcatcagtcacggag
gacctcatcatgatgctctttggccagctgggtgaggtgcgcagctgcaagatgttccgt
gagcctaccaccgacccctattgctttgtagagttttgtgatcatatgactgctctcaat
gctattaccatgatgaatgacaaggtgcttcagaatcgaaaaatgagggttgactgggcc
acgggccagggtaataagaataaatacactaaagtagatacaactaggcatcaccatgta
tatgttggggatcttagtcctgaaatagatgaacaggccctcagagaggcctttcaggta
tttggtgagatttcagactgtaaggtagttaaggaccctcagagttttaagtcccgaggc
tatggctttgttgtgtttgtgaagaagatggatgcagagacgagcatcagtgcgatgaat
ggtcagtggctcggccgcaagatgatcaaaacgcgatgggccaccaggaagcccaccaac
actcccactgaaaataaacctgaacagaagaagttgaattatgaagaaatttataaccaa
acaactcctaccaacaccacagtgttttgtgggggcttaaagcaggacatctcggaggaa
atgcttcataaatcatttcagccgcatggtcagattgaaaaaattaagatcttcaaggaa
aaggggtatgcctttatcaaatatacaaataaggaaagtgcctgtcaggccattgttgag
ttacacaattctaacttaaatggtcagataattaggtgctcatggggaaaggacactggt
gcagaccaagtgaataacccagctcaggaggccaacggagcccaacccaacatggccagc
tttcccaatggaggagggtatcccaaccagatgggtcagatgggttactggcaatattat
cctcagcagatgtcctacaaccaaatgccatatggacaatacccttatggttaccagccg
aatcccgggtacatgtggatggggtggggccagcaggggtggggccagcccgggcagcca
gcccccccagcccctcagcaagggcagccccagcagtga
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