Congregibacter brevis: R0137_04630
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Entry
R0137_04630 CDS
T10793
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cbrv Congregibacter brevis
Pathway
cbrv00300
Lysine biosynthesis
cbrv00470
D-Amino acid metabolism
cbrv01100
Metabolic pathways
cbrv01110
Biosynthesis of secondary metabolites
cbrv01120
Microbial metabolism in diverse environments
cbrv01230
Biosynthesis of amino acids
Module
cbrv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cbrv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R0137_04630 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
R0137_04630 (dapF)
Enzymes [BR:
cbrv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
R0137_04630 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF4785_1st
Draxin
Motif
Other DBs
NCBI-ProteinID:
WOJ97865
UniProt:
A0ABZ0IFH9
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Position
complement(1054186..1055016)
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AA seq
276 aa
AA seq
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MPVKFTKMHGAGNDFVMIDTISQRIKLRPRDIRRIADRRRGVGCDQVLLVEPPGQPEADF
RYRIFNADGSEAGQCGNGARCFARFVRHRRLTHLKKMVVETGSSLMTLTLRDNHEVEVDM
GPPVFSPSDVPFNRDQEATEYKLKVAEEQLRVGAVSMGNPHAVLRVSSVDDGSLERLGEA
IRSHSDFPEGTNAGFLEVVDRQKVRLRVFERGVGETEACGSGACAAVVYGRRMGWLDDRV
TVELTGGKLTVQWTGGNNPVLMTGPTAISFEGTVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggttaaatttacaaaaatgcatggcgcgggtaacgacttcgtcatgatcgacacc
attagccaacggattaagctgagaccgcgagacattcgcagaatagctgaccgccgtcga
ggcgttggttgtgatcaggtcttactggtagagcctccggggcagccggaagcggatttt
cgctatcgtatttttaacgcagacggcagtgaggctggacaatgcggcaatggtgcgcgc
tgcttcgctcgttttgttcgccaccgccgactcacgcaccttaagaaaatggttgtcgaa
accggcagcagcttgatgacgctcacgcttcgggacaaccacgaagtcgaagtcgatatg
ggcccacctgtattctccccctctgacgttccctttaaccgagatcaggaagccaccgaa
tacaagcttaaagtcgcggaggaacagcttcgtgtaggcgctgtgtccatggggaaccct
cacgccgtgctgcgtgtatcgtcagttgatgatggcagtctggaacgacttggtgaggct
attcggagccacagcgactttcctgagggaacaaacgccggatttttagaagttgtcgac
cgacaaaaagtacgactgcgagtcttcgagcgcggcgtaggagaaaccgaagcctgcggc
tccggcgcctgtgcagcggtggtctatggccgacgcatgggatggctggacgacagagtg
acagtggaattaaccgggggtaagctgacggtgcagtggacgggcgggaacaatcccgta
cttatgactggccccacagcgatcagcttcgaaggtaccgtcagactctag
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