Congregibacter brevis: R0137_05620
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Entry
R0137_05620 CDS
T10793
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbrv Congregibacter brevis
Pathway
cbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0137_05620 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrv03019
]
R0137_05620 (pnp)
03016 Transfer RNA biogenesis [BR:
cbrv03016
]
R0137_05620 (pnp)
Enzymes [BR:
cbrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
R0137_05620 (pnp)
Messenger RNA biogenesis [BR:
cbrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R0137_05620 (pnp)
Transfer RNA biogenesis [BR:
cbrv03016
]
Prokaryotic type
tRNA degradation factors
R0137_05620 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_2
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
SPATA25
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
WOJ98053
UniProt:
A0ABZ0IEU7
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All DBs
Position
1285997..1288114
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AA seq
705 aa
AA seq
DB search
MNPVTKTFQYGGQTVTLETGRIARQATGAVLVTVENTSVLVTVVAEKTAREGRDFFPLAV
HYTEKAYSVGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFADGFMNEVQVICTVMSAD
KHIDPDIPAMIGTSAALAISGCPFNGPIGAARVGFNDAEGYILNPTYDQLPESKLEMVVA
GTQDAVLMVESQADQLTEDQMLGAVLFAHQEMQVVIKAVEELAAEAGKPSWDWQAPAIDE
GLVNAVEEKAKADLGEAYRITDKAERYARVGEIREACVAELATEGGPSADLVKEYFKKVE
KSLVRNRIIAGEPRIDGRDTRTVRQIACEVDVLAKAHGSALFTRGETQAIGAVTLGSTRD
SQIIDALEGERRDPFMLHYNFPPYSVGEAGRVGFTSRREIGHGRLARRGLAAVLPNLEEF
PYTIRVVSEITESNGSSSMASVCVGSLAMMTAGVPLKAPVAGIAMGLVKEGNQFAVLTDI
LGDEDHLGDMDFKVAGTAEGVTALQMDIKIEGITEQIMEIALEQAMQARLHILGQMNAVL
AAPREVTSENAPSMVTLKVDSDKIRDIIGKGGAMIRSITENSGATVDIEDDGTVRVFGQD
QASRDKAVAMIEEITAEAEVGAIYTGKVERIVDFGAFVNILPGKDGLLHISQIANERVEN
VSDHLTEGEEVRVKVLDVDQRGRIKLSIKELLEDDAAPAEEAGDA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccagttactaaaacctttcagtatggcggccaaaccgtcacgctggaaacaggc
cgcatcgcccgtcaggcgaccggcgccgttcttgttaccgttgaaaacactagtgtgttg
gtaaccgttgttgccgagaagactgctcgcgaaggtcgtgacttcttccctctggccgtg
cactacaccgagaaggcttattctgtgggcaagatccccggtggtttttttaagcgtgaa
gctcgccccagcgaaaaagagacactgacatctcgattgattgaccggcccatccgtccg
ttgttcgcggacggattcatgaacgaagtacaggttatctgtactgtgatgtctgccgac
aagcacatcgatcccgatatccctgcaatgattggtacttcagcagcactcgcgatttct
ggatgtcctttcaatggacctattggtgcagcgcgtgtcggattcaacgacgctgagggt
tacatcctcaatccaacttatgaccaactgcccgagagcaagcttgagatggtcgttgca
gggacgcaggacgccgtactcatggttgagtctcaggccgaccagctgaccgaagatcag
atgcttggtgcggttttatttgcacaccaggaaatgcaggtcgttataaaagcggttgag
gagctggctgcagaagctggcaagcctagttgggactggcaggcacctgccatcgatgaa
gggcttgtcaacgcggttgaagagaaagcaaaagccgatcttggtgaggcttatcgtatt
acggacaaggctgagcgttacgcacgcgtcggagagatccgcgaggcttgcgttgctgag
cttgcgacggaaggtggtcctagcgctgacttggtcaaggaatacttcaagaaggtcgag
aagtctctggtacgaaaccgcatcattgccggcgagccgcgtattgatggtcgcgacaca
cgcactgtacgccaaatcgcttgcgaagtagacgtattggccaaagcccacggttctgca
ctgttcactcgtggcgaaactcaggctattggtgctgtaacgctcggttctacccgcgac
tcccagatcattgacgcgctggaaggcgagcgtcgtgatcctttcatgctgcattacaac
ttccctccctactctgtaggtgaggctggtcgtgttggttttaccagccgccgcgaaatc
ggccacggccgtttggcgcgtcgcggtctagcggcggttcttcctaacctggaggaattc
ccctacacgatccgcgttgtgtcggagattacagagtccaacggctccagctctatggcg
tcggtatgtgtaggctctctcgccatgatgaccgccggtgtgcctctgaaggctcccgtt
gcgggtattgccatgggtctcgtgaaggaaggcaaccagtttgctgttctcaccgacatt
ctgggcgacgaagatcatctgggtgacatggactttaaggtcgctggtaccgctgagggt
gttactgccctgcagatggatatcaagatcgaaggcatcaccgagcagatcatggagatt
gctttggagcaggccatgcaagctcgcttgcacattctgggtcagatgaatgcagtgctt
gcagcaccgcgggaagtgacttctgagaatgctccgagcatggtgactctgaaggttgat
tccgacaagatccgcgacatcattggtaagggtggcgcgatgattcgttccatcaccgag
aactcaggcgctacagttgatatcgaagatgacggcacggtacgcgtattcggtcaggac
caggcttcacgcgataaggctgtagcgatgatcgaagagatcactgcggaagctgaagtg
ggtgctatctacaccggtaaggttgagcgtatcgtcgacttcggcgctttcgtgaacatc
ctccccggtaaggacggactgctgcatatctctcagatcgcaaacgagcgcgtagaaaac
gtatctgaccacctgactgaaggtgaggaagtgcgcgttaaggttctggatgtggatcag
cgtggtcgtatcaagctgtccatcaaggagctccttgaagacgatgctgcgcctgcagaa
gaagcgggcgacgcctaa
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