Congregibacter brevis: R0137_05660
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Entry
R0137_05660 CDS
T10793
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cbrv Congregibacter brevis
Pathway
cbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0137_05660 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrv03019
]
R0137_05660 (pcnB)
Enzymes [BR:
cbrv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
R0137_05660 (pcnB)
Messenger RNA biogenesis [BR:
cbrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
R0137_05660 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WOJ98061
LinkDB
All DBs
Position
complement(1295552..1296835)
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AA seq
427 aa
AA seq
DB search
MNVIPRDQHCVSRKDISPGALKVMARLRDREHQAYLVGGAVRDLLLGGHPKDFDIATDAT
PEEVHALFGNSRIIGRRFRIVHVRFGREVIEVTTFRGHHDDGDTATTAAKRSSRGLLLRD
NVFGTLEEDAVRRDLTVNALYYDSGSFEVFDQVGGLDDLEARQVRVIGDPAKRYREDPVR
MLRCLRFAAKLDFRVEKASGAPISELAGLLDDIPAARLFDEFGKLFLAGNAQATLRLLRE
YRCFDHLFPDSARLADSDPFYDQLLDAAMGNTDQRIRQGKPVTPAFILAAVLWPTVCERR
KQLESQGEKPVPAMHSAGQEIVAQACQRIAIPRRFSMPMREIWEMQLRLPRTEGKRALEL
MSKRRFRAAYDFLLLREQAGEDCKGLGETWTRLQEEHGPIEIVDSPEDHRPPRRRRRGGR
RRSAPPA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcatacccagagatcaacactgcgtctcgcgcaaggacatcagtccgggcgcc
ttgaaagtcatggcgagactacgggaccgtgagcatcaagcctatttagtaggcggggcg
gttcgcgatctgttgctcggtgggcatcccaaagatttcgatatagccacggacgctaca
cctgaagaagtccacgcccttttcggcaactctcgcatcattggccgccgctttaggatc
gtacacgttcgctttggccgtgaagtgatcgaagttacgacctttcgcggacaccatgat
gacggcgacacagcgaccaccgctgccaaacgctcctcccgaggtcttttgttacgcgat
aacgtttttggcacgctggaagaagacgccgtacgccgtgacctgacggtgaacgccctg
tattacgacagcggaagcttcgaggtatttgaccaagtgggcggcctggatgaccttgag
gctaggcaagtgcgcgtcatcggagaccccgccaagcgataccgcgaagaccccgtgcgc
atgcttcgctgccttcgtttcgcagcaaagctcgattttcgtgtcgagaaagccagcggc
gcgcctatttccgagcttgccgggctattagacgatataccggcggctcgactgttcgat
gagttcggcaagctatttctcgcgggcaacgctcaggccaccctgcgcttgctcagagaa
taccgatgctttgatcatctgttccctgacagtgcacgcctcgccgatagtgatcctttt
tacgaccagttgcttgacgccgccatgggcaacacagatcaacgcattcgtcagggcaag
cccgtcacacccgcatttattttagccgctgtgctgtggcctaccgtttgcgagcgtcgc
aaacagctggagtcacagggcgagaaacctgtgccggccatgcatagcgcgggacaggag
atcgttgctcaagcctgccagcgaattgcaataccccgcagatttagcatgcccatgcgc
gaaatctgggaaatgcagcttcgtctgccccgcacggaaggtaaacgcgccttagaactg
atgagcaagcggcgctttcgagccgcttacgacttcctgctgctgcgagagcaggcgggc
gaagactgcaagggccttggagaaacatggacacggcttcaagaagaacacggccctatc
gagatcgtcgactcccccgaagatcaccgcccaccgcgtcgtcggcgtcgaggcggacgt
agacgctcggcacctcccgcgtga
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