Congregibacter brevis: R0137_07050
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Entry
R0137_07050 CDS
T10793
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
cbrv Congregibacter brevis
Pathway
cbrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0137_07050 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbrv03019
]
R0137_07050 (rhlB)
Enzymes [BR:
cbrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R0137_07050 (rhlB)
Messenger RNA biogenesis [BR:
cbrv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R0137_07050 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WOJ98319
UniProt:
A0ABZ0IFK2
LinkDB
All DBs
Position
1619841..1621136
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AA seq
431 aa
AA seq
DB search
MTSSNRSNTSSSHSGGARSSKNGRAKTAAETASWSVDEFDVAPEEGKTRFHDLDLHSSLM
HGIAEIGFEYCSPIQAQVLPHTLQGHDAIGKAQTGTGKTAAFLITIFDDLLKNPHEGERF
LGEPRALVIAPTRELVMQIAADAADLGKHTGLNTCTLIGGMDYQKQLNQLGREVVDLVVA
TPGRLIDFTGRRDLVLDQVEVLVLDEADRMLDMGFIPQVKRIVRQTPHKDYRQTLLFSAT
FTQDIINLSQQWTTEAVTVEIEPDHVATDTVDQRIYLASSEERFRILVNLLRSDDASSVI
VFANRRDQVRRLFERLRKASITCGMLSGEIAQAKRTKTLDQFKKGEISVLVATDVAGRGI
HVDGVTHVVNYNLPEDPEDYVHRIGRTGRAGASGTSISFASEDDAFLLPDLEALLGEPVV
CEHPPEDLLSR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgacgagttccaatcgatctaacacttcctcttctcattctggcggtgcccgctcttcc
aaaaatggtcgggcaaaaaccgcagcggaaacggcttcctggagcgtcgatgagttcgat
gtggcaccagaagagggtaaaacgcgttttcacgatctagacttgcactccagcttgatg
cacgggattgcggaaattggcttcgagtactgctctccaattcaggcgcaggttttgccg
cacactctccaaggccatgacgctatcggcaaggcgcagacgggcacaggaaaaactgct
gcgtttctgattactatttttgatgatctccttaagaacccccacgaaggtgagcgcttt
ttgggcgagccccgcgccctggtgattgcgccgacgagagaattggtgatgcagatcgcc
gcagacgcggccgatctcggtaagcataccggtctgaacacttgtactttgatcggtggt
atggattaccagaagcagttgaatcagttggggcgtgaagtagtcgatctcgtcgtggcg
acaccgggacggctcatcgacttcacgggacgccgcgacttggtgctagaccaggttgaa
gtgctcgtacttgatgaagccgaccgcatgctggatatgggttttatcccccaggtcaaa
cgcatcgtgcgtcaaacaccgcacaaagattatcgtcagacgctgctgttttccgcaacg
tttacccaggacattatcaacctatctcagcaatggaccaccgaagcagtcaccgtagag
atcgagcctgaccacgtggccacagacaccgtggatcaacgcatttatctcgcaagtagt
gaggagcgcttccgtattctggtgaatctattgcgtagtgatgatgcgagttcggtcatc
gtgtttgccaaccgtcgcgaccaggtacgccgcctcttcgagcggcttcgtaaagccagt
atcacctgcgggatgctcagcggcgaaatagcccaggccaagcgcaccaagactctcgat
cagtttaagaagggtgagatttcggtactggtggctacggacgtcgccggtcgaggcatc
catgtcgacggcgtaacccatgtcgtcaactacaacctcccggaagacccggaagattac
gttcaccgcatcggccgaaccggtcgcgcaggtgccagcggcacgtccattagcttcgcc
agtgaagacgacgcgtttttgctacctgatctcgaagccttgctcggcgaaccggtggtt
tgtgagcatccgcccgaggatttgttgtctcgctga
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