Congregibacter brevis: R0137_10745
Help
Entry
R0137_10745 CDS
T10793
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbrv Congregibacter brevis
Brite
KEGG Orthology (KO) [BR:
cbrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbrv03032
]
R0137_10745 (topA)
03400 DNA repair and recombination proteins [BR:
cbrv03400
]
R0137_10745 (topA)
Enzymes [BR:
cbrv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
R0137_10745 (topA)
DNA replication proteins [BR:
cbrv03032
]
Prokaryotic type
DNA Topoisomerases
R0137_10745 (topA)
DNA repair and recombination proteins [BR:
cbrv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R0137_10745 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
CysS_C
Motif
Other DBs
NCBI-ProteinID:
WOJ95722
LinkDB
All DBs
Position
2454034..2456754
Genome browser
AA seq
906 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFVVKSSVGHIRDLPTAGSAKTTDAKERAAKAAQTRK
MSPEQKAVQKKTRAREQLVRRMGIDPDQGWEANYEILPGKEKVVSELRKLAENADTVYLA
TDLDREGEAIAWHLREAIGGDDDRYQRVVFNEITKKAIQDAFSQPSRIDQARVNAQQARR
FLDRVVGYMVSPLLWAKVARGLSAGRVQSVAVRLIVEREREIRAFVPEEYWEIHADLETK
AAEKARFEVKRLRGEKFRPNNETDAMAARDALAEADYVVSDREDKPTRSKPPAPFITSTL
QQAASTRLSFSVKKTMMLAQRLYEAGYITYMRTDSTNLSADAVQACRDYITSAYPKEYLP
EQAARYSSSDNAQEAHEAIRPSDVNVLQGHLQNMERDAERLYELIWRQFVAGQMPAAEYT
STTITVSAGDFHLTTRGRIVRFDGYTRVQPPQGRKAEDTVLPDLSKGDELSLLKLDPVQH
FTAPPARYGEAKLVSELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGEIVTDR
LENSFSDLLDYGFTAGMEEHLDSVADGKLDWRQLLDDFYNEFKERVERAELPEPDGMQAN
APTMTDIPCKVCERPMQIRTASTGVFLGCSGYALPPKERCKETVNLIPGDEVIDADADDE
AESRLLRSKHRCKICNAAMDSYLIDEERKLHVCGNNPDCSGFEVELGKYKIKGYDGPTLE
CDKCSSEMQLKTGRFGKYFGCTNSECKNTRKLLRSGEPAPPKMDPVQMPELICDKVEDHY
VLRDGAAGLFLAASQFPKHRETRAPLVKELLPHRDEIDPKYTFLFDAPVEDGSGNPAQIR
YSRKTKEQYVMTEVDGKATGWKAFHDGGRWQIEEPPKRKPKTKAKAKAKTKAKTKTKAKA
KPSPAS
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcccttgtcattgtcgaatcccccgcaaaggccaagactatcaataagtac
ttgggcaacgattttgtggttaagtccagcgtaggtcacatccgtgatctacccacggca
gggtccgccaaaacgactgatgcaaaagagcgcgctgcaaaggcggcccagacacggaaa
atgtcgcccgagcaaaaggccgtgcagaaaaaaacacgggcacgcgagcagttggttcgt
cgcatgggtattgatcctgaccaaggctgggaagcgaactacgaaatcctgccggggaag
gaaaaggtagtttcggagctgcgtaagttagccgaaaacgccgatacggtttacctcgca
acggatctcgatcgcgagggagaggccattgcctggcaccttcgtgaggctattggcggc
gatgacgaccgctatcaacgagtggtcttcaatgaaatcaccaaaaaggcaattcaggat
gctttttcccaaccgtcgcgcatagatcaagcgcgggtgaatgcccagcaggcgcggcgc
tttctggatcgcgttgtaggctacatggtgtcgccattgttgtgggccaaggtcgctagg
ggtttgtccgcaggacgtgtgcagtctgtggcggtacgtttgatcgttgagcgcgaacga
gagattcgtgcattcgtccccgaggagtactgggagatccacgcggatctcgaaaccaag
gcggccgaaaaagcacgctttgaagtgaaacgtctgcgcggtgaaaagtttcgcccaaac
aatgaaacggatgccatggcggcgcgagacgcccttgctgaggcggattacgttgttagc
gaccgtgaagataagcctacgcgctcgaagccaccggcgccgtttattacctcgaccctt
cagcaggcggcgagcacccgcctgagcttcagtgtgaaaaagaccatgatgttggctcag
cggctctacgaagcgggctacatcacctatatgcgaaccgactccacgaatcttagcgcg
gatgcggtgcaggcctgtcgggattatattacgagtgcttaccccaaggagtacctgccc
gagcaagcggctcgctattcttccagtgacaatgcgcaggaagcgcacgaggcgattcgt
ccatcggatgtgaacgttctgcaggggcatttgcagaatatggagcgtgatgcggagcgt
ctttacgaactgatctggcgtcagtttgtggccggtcagatgcctgcggctgaatacacc
tcgacaacaatcacggtgagtgctggagactttcatcttacgacccgcggtcgcatcgtc
cgcttcgacggttatacccgtgtgcagccacctcagggacgtaaagccgaagatacggtg
ctgccagacctttccaagggcgatgagctttctttgctcaagctagatcccgttcagcat
ttcacagcgccgcccgcgcgttacggtgaggcgaaactcgtaagtgagctggagaagcgg
ggaataggacggccttcgacctatgcgtctatcatttccacgattcaggatcgtggttat
gttcgcctcgagaaccgccgtttctatgccgagaaaatgggcgaaatagtcacggaccgc
ctcgaaaacagctttagcgatcttttggactacggctttaccgctgggatggaggagcac
cttgattccgtcgccgacggtaagctggattggcggcaattgttggacgacttttataac
gagtttaaagaacgggtagagcgcgcggagcttcctgagcccgatggcatgcaggccaat
gcacccaccatgaccgatattccctgcaaggtctgcgaacggccaatgcagattcggacc
gcaagtactggggtgtttttgggctgttccggttacgcgttgccacccaaagagcgctgc
aaggagacggtcaacctgattccaggcgacgaagtcatagacgccgatgcggatgatgag
gccgaatcaagattgctgcggagcaagcatcgctgcaagatttgtaacgcggccatggac
agctatctcatagacgaggaacggaagttacacgtatgcggtaacaaccctgattgctca
ggctttgaggtcgagctgggtaagtacaaaattaagggctacgacggccctactttggaa
tgcgataagtgcagtagcgaaatgcagcttaagacagggcgtttcggtaagtactttggt
tgcaccaatagcgaatgtaagaacacccgcaaactgttgcggagcggcgagcctgcgcca
ccgaagatggatccagtgcagatgcctgagctcatctgcgacaaagtagaggatcactac
gtgttgcgcgacggcgcggcaggtctctttctggctgcaagccagttcccgaaacaccgg
gagacgcgcgctcctctggtgaaagagttgctgccccacagggacgaaatcgatccaaaa
tatactttcttgtttgatgctccggtcgaagacggcagcggcaatcctgcgcagattcgt
tacagccgaaagaccaaagagcaatatgtaatgactgaggtggacggcaaggcgactggt
tggaaggctttccacgacggtggacgctggcaaatagaagagccgccaaaacgaaagccc
aaaaccaaggcgaaagccaaagcaaagacgaaagccaagacaaagacaaaagcgaaggca
aaaccttctccggcgtcctag
DBGET
integrated database retrieval system
