Coxiella burnetii RSA 331: COXBURSA331_A0595
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Entry
COXBURSA331_A0595 CDS
T00632
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cbs
Coxiella burnetii RSA 331
Pathway
cbs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
COXBURSA331_A0595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbs03019
]
COXBURSA331_A0595
03009 Ribosome biogenesis [BR:
cbs03009
]
COXBURSA331_A0595
Enzymes [BR:
cbs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
COXBURSA331_A0595
Messenger RNA biogenesis [BR:
cbs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
COXBURSA331_A0595
Ribosome biogenesis [BR:
cbs03009
]
Prokaryotic type
rRNA processing factors
COXBURSA331_A0595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Thermo-DBP
Motif
Other DBs
NCBI-ProteinID:
ABX77278
LinkDB
All DBs
Position
complement(502948..505104)
Genome browser
AA seq
718 aa
AA seq
DB search
MKRMLINATQPDEVRVAITDDSKLIDLDIEIPGQEQKKSNIYKGIITSIEPSLGAVFVNY
GSERHGFLPLKEISREYFLQDIEGDFDSIDINRVLKLGQELVVQVDKEERGTKGAALTTF
ISLAGSFLVLMPNNPRAGGISRRIEGDERDQLRETINQLSLPEGMGLIVRTAGLGRPKEE
LEWDLKILLRYWEAVKQAAVAKPGPYLIHQESDVIIRAIRDYLRQDVEEILIDDEVAFEN
ARHYINQVRPQFVERLKLYREHLPLFSRFQIEQQIENAHQREIRLPSGGSLIIDHSEALI
AIDINSARATRGASIEETALSTNLEAAEEIARQLRIRDIGGLIVIDFIDMTPLRNQREVE
NCLRNALSQDRARIQIGRISRFGLLEMSRQRLRSSLTRSTQIACPRCNAEGTIRSIESLG
LSIIHIIQEQASKAKNIHFQLQAPVDLATYLINEKRELLRGIEHHYPVKITIVPNQYMET
PLYQLRQIKIDPASLEHGKGMASYKLTKVFKTEAPQKQEIRALSEPAIQQFLTSPPAPTT
PRKTPTPGLFKRLMGKMFGSEEEPSTAVTPPVKPHVPERHKPSSPPRGRRQGGYASRKST
GPRRHHPRSGGGDHGQNRHGARSRRGTRGGRRDHGGGRGGPGYHTQSTGPMPPLGEDVVD
VNQLPMSTPPSPPPPFLTDADVPPSRDERRSGGINGDADHGAKPHPNGKVSDDNRGNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgattaacgccactcagcctgatgaggtgcgcgtagctattactgac
gactctaaattaattgatctcgacatagaaattcccggtcaagagcagaaaaaatccaat
atttacaaaggcatcattaccagcattgagccaagtctcggtgcggtgtttgttaattat
ggcagcgaacgccacgggtttttgccgctgaaagaaatctcccgggaatattttctccag
gacatcgaaggcgattttgattctattgacatcaatcgggtgcttaaactaggtcaagaa
ctggtcgttcaagtagataaagaagagcgggggacgaaaggcgccgccttaacgacattt
attagtttggcgggttcttttttagtacttatgcccaacaatccccgagccggcggcatt
tcgcgccgcatcgaaggcgatgagcgcgatcaattgcgcgaaacgattaaccaacttagc
ctccctgaagggatgggcttgattgtccgaacggcaggattagggcggcctaaggaagaa
ttagaatgggatttaaaaattttactgcgctattgggaagcggttaaacaagccgctgtc
gctaaacccgggccttatttgattcaccaagaaagtgatgtcatcatccgggcgattcgc
gactacttgcgacaagacgtcgaagaaatccttatcgatgatgaagtggcctttgaaaat
gctcgacattacattaatcaagtccgtcctcaatttgtagaacggctaaaactttaccga
gaacatctcccgctcttcagtcgattccaaatcgaacaacagattgagaatgcgcaccaa
cgtgagattcgccttccttcgggaggttctttaattatcgatcacagcgaagctttgatc
gctattgatattaactccgctcgcgctacgcggggggcgagcatcgaagaaactgcgctt
tccaccaatttagaagccgcggaagagatcgctcgccaattgcgcattcgtgacattggc
ggtctgattgttatcgactttatcgacatgaccccgcttcgcaatcaacgcgaagtcgaa
aattgtctgcgcaacgcattaagccaagaccgagctcgtatccagattgggcgtatctcc
cgatttggtttgttggaaatgtctcgccaacgcttgcgatcttcgctcacacgttccact
caaatcgcctgcccccgatgcaacgccgaaggtacaatacgtagcattgaatcattggga
ttatccattatccacatcatccaagagcaagcttccaaagccaaaaatatccatttccaa
ttacaagcgccggttgatttggcgacttacctcattaatgaaaaacgggaattattacgg
ggcattgaacaccattacccggtaaaaattaccatcgttcccaatcaatatatggaaacc
ccgctttatcaattacggcaaattaaaatcgaccctgccagtctcgaacacggtaaaggc
atggccagctacaaactcactaaggtgttcaaaacagaggcgccacaaaaacaagaaatc
agagccttgagtgagcctgccatccagcagtttttaacgtcgcctccggcgccaacaacg
cctcgtaaaacgcctacccccggcttattcaaacggttaatgggtaaaatgtttgggagt
gaagaagaaccttcaacggccgtgacgcccccggttaaaccccacgtgcctgaacggcac
aagccgtcttcccccccaaggggtcgaaggcaaggcggctacgcttcgcgcaaatcgaca
gggcccaggcgacatcatcctcgcagcggtggcggcgaccatgggcaaaaccgacacggg
gctcgctcacgccgcggaacgcgaggcggtcgccgtgatcacggcggagggcggggcggc
cccggctatcatacgcaatcgacaggaccgatgcccccgctgggagaagacgttgtagat
gtaaaccagctccctatgtctacaccgccatcgccaccaccaccttttcttacagacgcc
gacgtcccgccttctcgggatgagcgccgctctggcggcattaatggagatgcggatcac
ggtgctaaacctcatcctaatggtaaagtgagcgacgataatagaggcaatcggtaa
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