Clostridium botulinum E3: CLH_0393
Help
Entry
CLH_0393 CDS
T00767
Name
(GenBank) RNA pseudouridine synthase family protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cbt
Clostridium botulinum E3
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbt03009
]
CLH_0393
Enzymes [BR:
cbt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CLH_0393
Ribosome biogenesis [BR:
cbt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CLH_0393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SPP1_Dit
Motif
Other DBs
NCBI-ProteinID:
ACD51287
LinkDB
All DBs
Position
410232..410948
Genome browser
AA seq
238 aa
AA seq
DB search
MERLDKIISNLGYGSRKEAKLLAKKGLIEVDGKIIKDSSVNIDPEKSIVKINGEEIFYRK
YIYLMMNKPTGVISATHDSKDETVIDLLELDHQIFDPFPVGRLDKDTVGLLLLTNDGDFN
HRMISPKWHVDKVYYAKIDKEVNEKDQEAFKKGVVLDDGYKCLEAKLDIISASPEGSEVR
ITIQEGKYHQVKRMFEARDKKVVYLKREEFGGLILDETLEEGEYRELSDEELAILNKN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggagagattggataaaataatttctaatttaggatatggaagtagaaaagaagctaaa
ttgttagcaaaaaaagggttaattgaagttgatggaaagataattaaagatagtagtgta
aatatagatcctgaaaaatctatagttaagataaatggagaagagatattttatcgtaaa
tacatatatttaatgatgaataaaccaacaggagtaatatcagcaactcatgattcaaaa
gatgaaactgttattgatttattagaattagatcatcaaatttttgacccatttccagta
gggagattagataaagatactgttggactactattattaactaatgatggggattttaat
catagaatgatatcacctaaatggcatgttgataaagtttattatgctaagatagataaa
gaagtaaatgaaaaagatcaagaagcatttaaaaagggtgtagtattagatgatggatat
aaatgcttggaagctaaattagatattatatctgcgtcaccggaaggctcagaagttaga
attactatacaagaaggaaaatatcatcaagtgaaaagaatgtttgaagcacgtgataaa
aaggtagtatatctaaaaagagaagaatttggtggtttaatactagatgaaactttagaa
gaaggcgaatatagagaattatcagatgaagaattggctattttaaataaaaattaa
DBGET
integrated database retrieval system
