Clostridium botulinum E3: CLH_0394
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Entry
CLH_0394 CDS
T00767
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbt
Clostridium botulinum E3
Pathway
cbt03420
Nucleotide excision repair
cbt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLH_0394
03430 Mismatch repair
CLH_0394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbt03400
]
CLH_0394
Enzymes [BR:
cbt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLH_0394
DNA repair and recombination proteins [BR:
cbt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLH_0394
MMR (mismatch excision repair)
Other MMR factors
CLH_0394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACD52091
LinkDB
All DBs
Position
411482..413731
Genome browser
AA seq
749 aa
AA seq
DB search
MELKSLLNKEQYEGAITIDGQLLILAGAGSGKTRVLTYRMAHMIEDMGIAPYNILAITFT
NKAAKEMKDRVISLIGSKAENMWISTFHSTCVRILRREIDKIGYTSNFTIYDTSDQKVLI
KECMKLLNINDKDISDQEILSKIGKAKDTMQTAQSFMRQNESNFREKKIAEAYEMYQRRL
KENNALDFDDLIFKAVELFKSNPEVLDFYQNKFKYIMVDEYQDTNGAQYELIKLLASKYK
NICVVGDDDQCIYQWRGADIQNILDFEKDYPNAKVIKLEQNYRSKSNILNAANVVIVNNA
NRKSKVLRTEQEAGDKIKIYRAFSDSDEGDFVSKQIAEIKSKENKEYKDFAILYRTNAQS
RIFEESLRRRGIPYKIVGGTRFYDRKEIKDILAYLKAIVNPRDDVSLKRIINVPKRSIGD
ATVSKIQEFANSFELDMWDALMEVRTIPTLTPRNANNIEVFTNLMEEFMSLSETAPISIL
IESILKDTGYLKQLEASKEIEDKSRIENLKELVSDAVDFEKNNEDKSLAAYLEKVSLVQD
TDKIEEQEDTIVLMTVHSAKGLEFPVVFMVGMENGIFPGNMSFEKESEMEESRRLCYVGI
TRAKETLFMTSAEVRRVFGRTVAYSQSDFINEIKPDLKEYVSGNRIGSGNGSNSNVKTQK
NDSYNNPHSLRSTIRKEFSKPSNMSVNDNNSEYLNANEITLGRKIQHEKFGIGTIVSVQG
SGDDKKLTIAFDKQGVKNLMLSFAKLKAI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaaatcattgcttaataaagaacaatatgaaggtgcaattaccatagatggc
caattgttaatattagctggagctggatcaggaaagacaagagtattaacatatagaatg
gcacatatgatagaagatatgggtatagcgccatataatatattagctattacctttact
aataaagcagcaaaggaaatgaaagatagagttatatcactaattggaagtaaagctgaa
aatatgtggatatctactttccattcaacttgcgttagaattttaagaagagaaatagat
aagattggttacactagtaactttacaatatatgatacatctgatcaaaaagtattaata
aaagaatgtatgaaacttttaaacattaatgataaagatatatcggatcaagagatacta
agtaaaattggaaaagcaaaagatactatgcaaactgctcaaagttttatgagacaaaac
gaatctaattttagagaaaagaagattgcagaagcatatgaaatgtatcaaagaagatta
aaagaaaataatgccttggattttgatgatttaatatttaaagccgttgaattatttaaa
tctaatccagaagtattagatttttaccaaaataaatttaaatacataatggtggatgaa
tatcaagatactaatggcgctcaatatgaattaattaagttattggcatccaaatataag
aatatatgtgttgttggggatgatgatcaatgtatatatcaatggagaggggcagatatt
caaaatatattggattttgaaaaagattatcctaatgctaaagtaattaaattagaacaa
aattatagatctaaaagcaatatattaaatgctgcgaatgtagtaattgttaataatgca
aatagaaaaagcaaagtgcttagaacagaacaagaagcaggggataagataaaaatatat
agagcattttcagatagtgatgaaggagattttgttagtaaacaaattgcagagattaaa
tctaaagaaaataaagagtacaaagattttgctatactatacagaactaatgctcagtca
cgtatatttgaagaaagtttaagaagacgaggaattccatataagatagttggtggaaca
agattctatgatagaaaagaaataaaggatattttagcctatcttaaagctatagttaat
ccaagagatgatgttagtttaaaaagaataataaacgttcctaaaagaagtataggtgat
gctacagtatcaaaaattcaagaatttgcaaatagcttcgaattagatatgtgggatgct
ttaatggaagttagaacgataccaacattaacgcctagaaatgctaataatatagaagtt
tttacaaatttaatggaagaatttatgtcacttagtgaaacagctcctatatctatatta
attgagtcaatacttaaagatacagggtacttaaaacaattagaggcatctaaggagata
gaagataaaagcagaattgaaaacttaaaagaacttgtttctgatgcagttgactttgaa
aaaaataatgaagataaatctttagcagcatatttagaaaaagtatcattagttcaagat
acagataaaattgaagaacaagaagatacaatagtattaatgacagttcatagtgctaag
ggccttgagttccccgttgtatttatggttggaatggaaaatggtattttcccgggaaat
atgtcgtttgaaaaagaatcggagatggaagagtcaagaagattatgttatgtaggaata
acgagggcaaaagaaacattgtttatgacatctgctgaagttagaagagtatttggtaga
actgtagcgtactctcaatcagattttataaatgaaataaagcctgatcttaaggaatat
gtaagtggaaatagaataggttcaggaaatggttctaattctaatgttaagactcaaaaa
aatgattcttataataatccacatagcctaagaagtacaataagaaaagaattttctaag
ccatctaatatgtctgttaatgataacaattctgaatatttaaatgctaatgaaattacc
ttaggtagaaaaatacagcatgaaaaatttggaattggtacaatagttagtgttcaggga
tctggagatgataaaaagttaactattgcgttcgataaacaaggagttaaaaatttaatg
ttatcatttgctaagttaaaagcaatataa
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