Clostridium botulinum E3: CLH_0508
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Entry
CLH_0508 CDS
T00767
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cbt
Clostridium botulinum E3
Pathway
cbt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLH_0508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbt03400
]
CLH_0508
Enzymes [BR:
cbt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLH_0508
DNA repair and recombination proteins [BR:
cbt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLH_0508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
PIF1
Helicase_RecD
PhoH
HHH
DNA_pol_lambd_f
AAA_22
nSTAND3
SLFN-g3_helicase
HHH_2
NTPase_1
AAA
AAA_23
AAA_12
NPHP3_N
ABC_tran
YlmH_RBD
AAA_28
UPF0758_N
UvrD_C
HHH_3
UvrD-helicase
T2SSE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACD51527
LinkDB
All DBs
Position
504044..506263
Genome browser
AA seq
739 aa
AA seq
DB search
MEVIDGFVENIVFKSEETGYVVCKIRTAKNLISAVGTIPFIKEGQNVRIKGHWTMHKQFG
QQFEIAEFEEILPDSLDGIEKYLSAGIIHGIGPVTAKKIIDKFGEKTLDILENHIEELME
IEGIGKKKFMIIYESYMEQNGLKEVILHFHKYGLSNNQCMKIYKKFGPSSNQVVSENPYI
LSEEIVGIGFKTADRIAMNLGISDNSEFRIKSGIKHALNQFCLLGNTYMPKEKLIEDCEK
LLSIERILIEESIYSIAASKNIILEKLGEEEAVYLLPYYYCELGVTNKIITLGMQTIQTI
NSDLDFEINVLEKEYNIKFAESQREAILGSFNNGIEIITGGPGTGKTTIIKCIIDIYEKN
GMDVILGAPTGRAAKRMTESTGREAKTIHRLLEIGVAEDDSVFGKSESSPLDTDVIIIDE
ASMIDIMLMHNLLKAVNLGTRLIIVGDVDQLPSVGAGNVLKDLIESEYIKVVRLNEIFRQ
GNESLITTNAHRINQGEAPILNQKDKDFFFIGEENLNKTVSVIIDLINRRLPSFNKQWNR
FRDMQVLSPMKKGVLGVNNLNVNLQKVFNPSSKEKKEKKIKEIIFREGDKVMQTKNNYSL
KWTRIKGEGEYEGVGVFNGDLGFIQSIDEENKSFTITFDDERKVIYDFMYLDELDLAYAT
TIHKSQGSEFKVVIIPVFMGSPFLMNRNLLYTGITRAKELVVVVGVKRALIYMVGNTNIM
ERYSGLKYRIKDILTNAIE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcatagatggctttgttgaaaacattgtatttaaaagtgaggaaactggctat
gtagtttgtaaaataagaactgctaaaaacttaataagtgcagtgggtactattccattt
ataaaagaggggcagaatgtaaggataaaaggacattggactatgcataaacaatttgga
cagcagtttgaaatagctgaatttgaagagatattaccggactcattagatggaatagag
aaatatttgagtgcaggaataatacatggaataggtccagttactgctaaaaagataatt
gataagtttggtgaaaaaactttagatatattagaaaatcacatagaagaattaatggaa
atagaaggcataggaaaaaagaaattcatgataatatatgaatcttatatggaacagaat
ggattaaaagaagttatactacattttcataagtatggattaagcaacaatcaatgtatg
aaaatatataaaaaatttggaccatcatctaaccaagtagtttcagaaaatccttatata
ttatctgaagagatagttggaattggatttaaaacagcagatagaattgctatgaatctt
ggtataagtgataattcggagtttagaattaaaagtggtataaagcatgctttaaatcag
ttttgcttattgggcaatacatatatgccaaaagaaaaattaatagaagattgtgaaaag
cttttatctattgaaagaatattaatagaggaaagtatatactcaatagctgcttcaaaa
aatataatattagaaaaattaggagaagaagaagctgtatatttacttccttattattat
tgtgagctaggagttacaaataaaataattactttgggtatgcaaacaatacaaactatt
aattctgacttggattttgaaataaatgtattagagaaggaatataatataaagtttgct
gaatcccaaagggaagctatacttggatctttcaataatggaattgaaataataacaggt
ggtcctggtacaggaaagactactataataaaatgtataattgatatatatgaaaagaat
gggatggatgtaatattaggtgcaccaactggaagagctgcaaaaagaatgacagaatca
actggtcgtgaagctaagactatacacagattattagaaataggtgtagctgaagatgat
tctgtttttggaaagagtgaatcatctccgttagatactgatgtcataattatagatgaa
gcttctatgatagatataatgcttatgcataatttgctaaaagccgttaatttaggcact
agattgataattgttggtgatgttgatcaattgccatcagtaggagctggaaatgtatta
aaagatttaatcgagagtgaatatattaaagttgtaagacttaatgaaatatttagacaa
ggaaatgaaagtttaataacaactaatgctcatagaataaatcaaggtgaggcaccaata
ttaaatcaaaaagataaggattttttctttattggtgaagaaaatttaaacaaaacagtt
agtgttatcatagatttaataaataggagacttccaagttttaataaacaatggaataga
tttagagatatgcaagtattaagccctatgaaaaaaggtgtacttggagtgaataattta
aatgtaaatcttcaaaaagtctttaatccatcatcaaaagaaaagaaagagaaaaagata
aaagaaattatttttagagaaggtgacaaagtaatgcaaactaaaaataattattcttta
aaatggactagaattaagggtgagggagaatatgaaggcgttggagtatttaatggtgat
ttaggttttatacaaagcatagatgaagaaaataagagttttactataacatttgatgat
gagagaaaagttatatatgattttatgtatttagatgaattagatctagcatatgctact
acaatacataaaagtcaaggtagtgaattcaaagtagtaataattccggtatttatggga
agtccttttttaatgaataggaatcttttgtatacaggtataactagagcaaaagaactt
gtggttgttgttggagtgaaaagagctttaatttatatggttggaaatacaaatatcatg
gagaggtattcaggattgaaatatagaattaaagacatactgactaatgcaatagaatag
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