Clostridium botulinum E3: CLH_1227
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Entry
CLH_1227 CDS
T00767
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbt
Clostridium botulinum E3
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbt03016
]
CLH_1227 (truB)
Enzymes [BR:
cbt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLH_1227 (truB)
Transfer RNA biogenesis [BR:
cbt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLH_1227 (truB)
Prokaryotic type
CLH_1227 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACD51727
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All DBs
Position
1297691..1298566
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AA seq
291 aa
AA seq
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MNGVLNVFKNKGMSSFDVVRKIKFTAKEKKVGHTGTLDPEAEGVLPVCLGKATKIIDYIM
NSRKVYKVKLLLGKNTTTYDLEGEVVKERDASHIKENDVKETILSFVGGYDQVPPMYCAL
KQNGVRLYQLARQGIEVEREARRINIYDICEIEYDLPYVSFKVTCSKGTYIRSLCYDIGE
KLNVGATMVNLIRTETSVFKEENSINIEDLTPENINDYIISIEDALSSYPKLIVNTSFTK
LLVNGVKVYDRRLSDEVIENDILYRVYDKENTFIGLGSKDNEGFKIQKLLV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgtactaaacgtatttaagaataaaggaatgtcttcttttgatgtagttaga
aaaataaaatttacagcaaaagaaaagaaagttggacatacaggaactcttgatccagaa
gcagaaggcgttttaccagtttgtttaggaaaagcaactaaaattatagattatataatg
aattccagaaaagtgtataaggtaaaattattgcttggaaaaaatacaacaacttatgat
ttagaaggtgaagttgtaaaagaaagagatgcctctcacataaaagaaaatgatgtaaag
gaaaccattctttcttttgtaggaggatatgatcaagttccaccaatgtattgtgcttta
aaacaaaatggagtaagactttaccaacttgcaagacaagggattgaagttgaaagagaa
gccagacgtattaatatttatgatatttgtgaaattgaatatgatttaccttatgtgtct
tttaaagttacatgttcaaaaggtacatatataagaagtttgtgttatgatattggcgaa
aagctaaatgtaggtgcaacaatggttaatttaataagaacagaaacttctgtatttaaa
gaagagaatagtattaatattgaagatttaacaccagaaaatattaatgattatataata
agtatagaagatgcactttcatcttatcctaaattaatagtaaacacttcatttacaaaa
ttattagtaaatggggtaaaggtatatgatagaagattaagtgatgaagttatagaaaat
gatattttgtatagagtatatgataaagaaaatacttttattggacttggtagtaaagat
aacgaaggatttaagatacaaaagttattagtttaa
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