Clostridium botulinum E3: CLH_1286
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Entry
CLH_1286 CDS
T00767
Name
(GenBank) ATP-dependent RNA helicase
Organism
cbt
Clostridium botulinum E3
Pathway
cbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLH_1286
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
SMC_N
HdcB
AAA_24
Flavi_DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ACD53815
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Position
complement(1363033..1364181)
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AA seq
382 aa
AA seq
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MTKSLNDLNLSSDIISALEKQNITVPTEIQSLVINEALENKDIMGESFTGSGKTLAYLLP
IFERINTETKDIQAIILAPTHELVMQIEAQIKLLSDNSGINVKSLGIIGDVNINNQIKKL
KEVKPHIIVGSTGRVLDLIRKKKITAHTIKTIVIDEVDNLLDPKRAQIVKDIIKTTMRDR
QLMAFSASITPEIVDSLKELMKDPLIVKSQGKSSINPNISHVYVKCDRRDKFEVLRKIIA
AEDPKRALIFVNDNKDIELTSLKLNYHNRECFAMSGSISKEERKNAIDSFKTGKIKILVS
SDVSARGLDITDITHVFNLDLPLKLDEYLHRSGRTARGNAKGTSICIVTDKQMNIIKKYE
KAFDVEFQEKIISNGVLKNKDK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcattaaacgatttaaatttaagttcagatataataagtgcattagaaaag
caaaatataactgttccaactgaaattcaaagtttagttataaatgaagctttagaaaat
aaagatataatgggagaatcatttactggaagtggtaaaactttagcgtaccttcttcct
atatttgaaagaataaatactgaaactaaagatattcaagcaataattttagcaccaact
catgaattagttatgcaaatagaggctcaaattaaattgctttcagataactctggaata
aacgttaaatcacttggaataatcggtgatgttaatataaataatcaaattaaaaagctt
aaagaagttaagcctcatataatagttggatcaactggtagagttcttgatcttataaga
aagaaaaagatcactgctcatactataaaaactattgtcattgatgaagttgataattta
ttagatccaaagagagctcaaattgttaaagatataattaaaacaactatgagagataga
caattaatggccttttctgcttctattactcctgaaatagttgattcattaaaggaatta
atgaaagatccattaatagttaaatcacaaggtaaatcttcaattaaccctaacatttcg
catgtatatgtaaaatgtgatagaagagataaatttgaagtacttagaaaaataatagca
gctgaagatccaaaaagagcattaatatttgttaatgataataaagatattgaattaaca
tctttaaaacttaattatcataatagagaatgttttgctatgagtggaagtatttctaaa
gaagaaagaaaaaatgctattgatagctttaaaacaggtaaaatcaaaatattagtttct
tcagatgtatctgctagaggtcttgatattactgatattactcatgtatttaatttagat
cttccattaaaacttgatgaatacttacatagatctggtagaactgctagaggtaatgca
aaaggtacttctatctgtatagttactgataaacaaatgaacataataaaaaaatatgaa
aaagcatttgatgtagaattccaagaaaaaattatttctaatggagtacttaaaaataaa
gataaataa
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