Clostridium botulinum E3: CLH_1503
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Entry
CLH_1503 CDS
T00767
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cbt
Clostridium botulinum E3
Pathway
cbt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLH_1503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbt03019
]
CLH_1503
Messenger RNA biogenesis [BR:
cbt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLH_1503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
PDEase_II
eIF-1a
Motif
Other DBs
NCBI-ProteinID:
ACD51285
LinkDB
All DBs
Position
1606584..1608248
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AA seq
554 aa
AA seq
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MKNKPKLKIIPLGGLGEIGKNITAFEYGDEIVVIDCGLAFPDEDLYGIDIIIPDVTYLIR
NKNKVKGFFITHGHEDHIGGIPYILQQINVPVYATKLTLALIESKLEEHHMLNDCKLNLV
EVGGSVKLKNFNVEFIRNNHSIPDACSIAMHTPMGVIVHSGDFKIDFTPIDGHVMNLQRY
AELGKKGVLLLMADSTNVLHKGYTMSEKTVGETLNGLFSKATGRVIVSTFASNVHRLQQI
SDCSIKNKRKIAFSGRSMEKISEIAMNLGYLSIPKEMIVSLDEIKNCPNDQITIVTTGSQ
GESMAALSRIAASTHKYIEIQKGDMVIISASPIPGNEKAVSNLINDLTEKGANVIYKTIE
DIHVSGHACEQELRVIQSLLKPKFFIPVHGEYKHLITHAKIAKSMGIEEDNIFILDTGDV
FELSKNKGKVIGKVPSGRVLIDGLGIGDVGNMVLRDRKNLAEDGIITVVIAIDRRNKVIL
SGPDIVSRGFVYVRNSEDLINNVRCIVTKVVEKCLDDNITQWAEIKNRIRREVDSFVYTT
MKRKPMILPVIVEI
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaataaaccaaaattaaaaataattccattaggtggacttggagaaataggaaag
aatattacagcatttgaatatggtgatgaaatagttgttatagattgtggtttagcattt
ccggatgaagatctttatggaattgacatcataattcctgatgttacatatttaataaga
aataaaaataaagtaaagggcttctttataactcatggtcatgaggaccatataggtggt
ataccgtatatattacaacagattaacgttccagtatatgcaactaaattaacattagca
ttaattgaaagtaaactagaagaacatcatatgttaaatgattgtaaattaaatcttgtt
gaagttggtggaagtgtaaaacttaagaattttaatgtggagtttattagaaataatcat
agtattccagatgcatgttcgatagctatgcacacaccaatgggtgttattgtgcatagt
ggagattttaagattgattttacacctatagatggtcatgtgatgaaccttcaaagatat
gcagaacttggaaaaaaaggcgtattgctattgatggcagatagcactaatgtattgcat
aaaggttatacaatgtcagaaaaaactgttggagaaacattaaatggacttttcagtaaa
gccacaggaagagttatagtatctacttttgcatcgaatgttcatagacttcaacaaatt
agtgattgttctataaaaaacaaaagaaagatagcttttagtggtagaagtatggagaaa
atatcagaaatcgccatgaatttaggctatttatctataccaaaagaaatgattgtatcg
ttagatgaaataaaaaattgtccaaatgaccaaattactattgtaacaacaggtagtcaa
ggtgaatcaatggcagcgctttctagaatagcagcttctactcataaatatatagaaata
caaaagggagatatggttataatttcagcatctccaataccaggaaatgaaaaagctgta
tcaaacttaataaatgatttgactgagaaaggtgctaatgtaatatataagactatagaa
gatatacatgtttcaggtcatgcatgtgaacaagaacttagagtaattcaaagcttgtta
aaacctaaattctttattcctgtacatggtgagtataaacatttgattacgcatgcaaaa
attgctaaaagcatgggaatcgaagaagacaatatatttatattagataccggtgatgta
tttgaattatcgaaaaataaagggaaagttattggaaaagtaccatcaggtagggttctt
atagatggccttggaattggtgatgtaggaaacatggtattacgagatagaaaaaattta
gcagaagatggaattataactgtagtaatagcaatagatagaagaaataaagtgatatta
tcaggaccagatatagtatcaagaggttttgtgtatgttagaaattctgaagatttaatt
aacaatgtaagatgtatagttacaaaagttgtggaaaaatgtttagatgataatataaca
caatgggcagaaattaaaaacagaataagaagagaagtggacagttttgtatacactaca
atgaaaagaaaacctatgatattacccgtaattgtagaaatataa
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