Clostridium botulinum E3: CLH_3002
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Entry
CLH_3002 CDS
T00767
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cbt
Clostridium botulinum E3
Pathway
cbt00521
Streptomycin biosynthesis
cbt00523
Polyketide sugar unit biosynthesis
cbt00525
Acarbose and validamycin biosynthesis
cbt00541
Biosynthesis of various nucleotide sugars
cbt01100
Metabolic pathways
cbt01110
Biosynthesis of secondary metabolites
cbt01250
Biosynthesis of nucleotide sugars
Module
cbt_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cbt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CLH_3002 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CLH_3002 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
CLH_3002 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CLH_3002 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
CLH_3002 (rfbB_1)
Enzymes [BR:
cbt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CLH_3002 (rfbB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Sacchrp_dh_NADP
adh_short
NAD_binding_10
NifZ
KR
NmrA
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
ACD53126
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All DBs
Position
complement(3222725..3223744)
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AA seq
339 aa
AA seq
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MKIVVTGGAGFIGGNFVHYMLKKYNEYKIICVDALTYAGNMETLESVKDNKNFNFYKIDI
ADRETVYDMFEKEHPDMIVNFAAESHVDRSIENPEIFLKTNIMGTAVLMDACIKYGINRY
HQVSTDEVYGDLPIDRPDLFFTEETPIHTSSPYSSSKASADLLVGAYNRTYGLPTTISRC
SNNYGPYHFPEKLIPLMIANALNDKELPVYGTGENVRDWLYVEDHCRAIDLIIHKGTVGE
VYNIGGHNERTNLEVVKTIIHELGKQENLIKFVGDRKGHDMRYAIDPTKIHNELGWLPTT
SFDEGIKKTIKWYLENRTWWENIISGEYANYYEKMYTYR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtagtaacgggtggagcaggtttcattggtggaaattttgtgcattatatg
cttaaaaaatataatgagtataaaataatttgtgttgatgctctaacttatgctggaaat
atggaaacattagaaagtgttaaagataataaaaactttaatttttataaaatagatatt
gctgatagagaaactgtgtatgatatgtttgaaaaagagcatccagatatgattgttaac
tttgcagctgaaagtcacgttgatagatcaatagaaaatccagaaatatttttaaaaact
aatattatgggaactgcagtacttatggatgcttgtataaagtatggaataaatagatat
catcaagtatctactgatgaagtatatggtgatttaccaattgatagaccagatttattt
tttacagaagaaacaccaatacatacatcaagtccatactcttcaagtaaagcatcagca
gatcttttggttggagcatataacagaacttatggcttaccaactacaatttcaagatgt
tcaaataactatggtccatatcatttcccagaaaagcttatacctttaatgattgcaaat
gctttaaatgataaagaattacctgtttatggaacaggagaaaatgtaagagactggctt
tacgttgaagaccactgtagagctattgatttaataattcataagggtacagtaggagaa
gtttataatataggtggacataatgagcggactaatctagaagtagttaaaacaattatt
cacgaattaggaaagcaagaaaatttaataaaatttgtaggagacagaaaaggtcatgat
atgagatacgcaatagatcctacaaagattcataatgaattaggatggcttccaactaca
agttttgatgaaggaattaaaaagactataaaatggtacttagagaatagaacttggtgg
gagaatattattagtggagagtatgcaaactattatgagaaaatgtacacatatagataa
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