Coxiella burnetii RSA 493: CBU_0486
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Entry
CBU_0486 CDS
T00124
Name
(RefSeq) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cbu
Coxiella burnetii RSA 493
Pathway
cbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBU_0486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbu03019
]
CBU_0486
03009 Ribosome biogenesis [BR:
cbu03009
]
CBU_0486
Enzymes [BR:
cbu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CBU_0486
Messenger RNA biogenesis [BR:
cbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CBU_0486
Ribosome biogenesis [BR:
cbu03009
]
Prokaryotic type
rRNA processing factors
CBU_0486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Thermo-DBP
Motif
Other DBs
NCBI-GeneID:
1208370
NCBI-ProteinID:
NP_819521
UniProt:
Q83E45
LinkDB
All DBs
Position
complement(425621..427783)
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AA seq
720 aa
AA seq
DB search
MKRMLINATQPDEVRVAITDDSKLIDLDIEIPGQEQKKSNIYKGIITSIEPSLGAVFVNY
GSERHGFLPLKEISREYFLQDIEGDFDSIDINRVLKLGQELVVQVDKEERGTKGAALTTF
ISLAGSFLVLMPNNPRAGGISRRIEGNERDQLRETINQLSLPEGMGLIVRTAGLGRPKEE
LEWDLKILLRYWEAVKQAAVAKPGPYLIHQESDVIIRAIRDYLRQDVEEILIDDEVAFEN
ARHYINQVRPQFVERLKLYREHLPLFSRFQIEQQIENAHQREIRLPSGGSLIIDHSEALI
AIDINSARATRGASIEETALSTNLEAAEEIARQLRIRDIGGLIVIDFIDMTPLRNQREVE
NCLRNALSQDRARIQIGRISRFGLLEMSRQRLRSSLTRSTQIACPRCNAEGTIRSIESLG
LSIIHIIQEQASKAKNIHFQLQAPVDLATYLINEKRELLRGIEHHYPVKITIVPNQYMET
PLYQLRQIKIDPASLEHGKGMASYKLTKVFKTEAPQKQEIRALSEPAIQQFLTSPPAPTT
PRKTPTPGLFKRLMGKMFGSEEEPSTAVTPPVKPHVPERHKPSSPPRGRRQGGYASRKST
GPRRHHPRSGGGGGGHGQNRHGARSRRGTRGGRRDHGGGRGGPGYHTQSTGPMPPLGEDV
VDVNQLPMSTPPSPPPPFLTDADVPPSRDERRSGGINGDADHGAKPHPNGKVSDDNRGNR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgctgattaacgccactcagcctgatgaggtgcgcgtagctattactgac
gactctaaattaattgatctcgacatagaaattcccggtcaagagcagaaaaaatccaat
atttacaaaggcatcattaccagcattgagccaagtctcggtgcggtgtttgttaattat
ggcagcgaacgccacgggtttttgccgctgaaagaaatctcccgggaatattttctccag
gacatcgaaggcgattttgattctattgacatcaatcgggtgcttaaactaggtcaagaa
ctggtcgttcaagtagataaagaagagcgggggacgaaaggcgccgccttaacgacattt
attagtttggcgggttcttttttagtacttatgcccaacaatccccgagccggcggcatt
tcgcgccgcatcgaaggcaatgagcgcgatcaattgcgcgaaacgattaaccaacttagc
ctccctgaagggatgggcttgattgtccgaacggcaggattagggcggcctaaggaagaa
ttagaatgggatttaaaaattttactgcgctattgggaagcggttaaacaagccgctgtc
gctaaacccgggccttatttgattcaccaagaaagtgatgtcatcatccgggcgattcgc
gactacttgcgacaagacgtcgaagaaatccttatcgatgatgaagtggcctttgaaaat
gctcgacattacattaatcaagtccgtcctcaatttgtagaacggctaaaactttaccga
gaacatctcccgctcttcagtcgattccaaatcgaacaacagattgagaatgcgcaccaa
cgtgagattcgccttccttcgggaggttctttaattatcgatcacagcgaagcattgatc
gctattgatattaactccgctcgcgctacgcggggggcgagcatcgaagaaactgcgctt
tccaccaatttagaagccgcggaagagatcgctcgccaattgcgcattcgtgacattggc
ggtctgattgttatcgactttatcgacatgaccccgcttcgcaatcaacgcgaagtcgaa
aattgtctgcgcaacgcattaagccaagaccgagctcgtatccagattgggcgtatctcc
cgatttggtttgttggaaatgtctcgccaacgcttgcgatcttcgctcacacgttccact
caaatcgcctgcccccgatgcaacgccgaaggtacaatacgtagcattgaatcattggga
ttatccattatccacatcatccaagagcaagcttccaaagccaaaaatatccatttccaa
ttacaagcgccggttgatttggcgacttacctcattaatgaaaaacgggaattattacgg
ggcattgaacaccattacccggtaaaaattaccatcgttcccaatcaatatatggaaacc
ccgctttatcaattacggcaaattaaaatcgaccctgccagtctcgaacacggtaaaggc
atggccagctacaaactcactaaggtgttcaaaacagaggcgccacaaaaacaagaaatc
agagccttgagtgagcctgccatccagcagtttttaacgtcgcctccggcgccaacaacg
cctcgtaaaacgcctacccccggcttattcaaacggttaatgggtaaaatgtttgggagt
gaagaagaaccttcaacggccgtgacgcccccggttaaaccccacgtgcctgaacggcac
aagccgtcttcccccccaaggggtcgaaggcaaggcggctacgcttcgcgcaaatcgaca
gggcccaggcgacatcatcctcgcagcggtggcggtggcggcggccatgggcaaaaccga
cacggggctcgctcacgccgcggaacgcgaggcggtcgccgtgatcacggcggagggcgg
ggcggccccggctatcatacgcaatcgacaggaccgatgcccccgctgggagaagacgtt
gtagatgtaaaccagctccctatgtctacaccgccatcgccaccaccaccttttcttaca
gacgccgacgtcccgccttctcgggatgagcgccgctctggcggcattaatggagatgcg
gatcacggtgctaaacctcatcctaatggtaaagtgagcgacgataatagaggcaatcgg
taa
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