Coxiella burnetii RSA 493: CBU_0550
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Entry
CBU_0550 CDS
T00124
Symbol
pbpA
Name
(RefSeq) cell elongation specific D,D-transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cbu
Coxiella burnetii RSA 493
Pathway
cbu00550
Peptidoglycan biosynthesis
cbu01100
Metabolic pathways
cbu01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cbu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CBU_0550 (pbpA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CBU_0550 (pbpA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbu01011
]
CBU_0550 (pbpA)
Enzymes [BR:
cbu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CBU_0550 (pbpA)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbu01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CBU_0550 (pbpA)
BRITE hierarchy
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF2633
Motif
Other DBs
NCBI-GeneID:
1208435
NCBI-ProteinID:
NP_819582
UniProt:
Q83DY8
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Position
complement(499296..501143)
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AA seq
615 aa
AA seq
DB search
MIGMNRERLTIKNIHLETHLFKSRCLTALILLLIFAFILIGRLIYLQIKNHHFYSTLSRH
NLLNIIPIEPNRGLIFDRNGVLLAKDIPTYILTILPNGTHHLNETIRELTKIIPISSDEI
KQFHHILYQYHRYQPVPLKYKLTNEEVARFYVNQYRFPDVRIETRMMRYYPLGDLTSDVV
GYVGRINARELQKINTNNYNIDDDIGKMGIEKYYENELHGTMGAEEAEINASGRIVRILK
RVPPTPGTNIYLTIDSNLQTEARKVLGEESGAIVAIQPSTGQVLALVTKPSFDPNPFVSG
LSQQDYQKLVNSPQHPLYNRAIRGQFASGSTVKPFLALFGLDMGIITPQYRIYDPGWFQL
PNTQHIYHDWRERGHGWVNVVKAIAVSCDVYFYNLAVALGIKRMDDILQRFGFGQLTGID
LPEEVPGLVPSPRWKMGTQGKPWYTGDTIEAGIGQGFFLVTPLQLAQATATLAEHGKRYR
PTLLFKSVEPTGKVNVQQPIPKPPIFLKNPDNWDIVIHAMQEVVDKPWGTADFFGRHPGF
TVAAKTGTAQVYGHQRDEDKSRTNIPKRLRNNHLFIAFAPVENPQIAVAVVVEHSAMADK
MAGEIINYYFKHQQK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcatgaatagagaacggctgacgattaaaaacattcatcttgaaacacacttg
ttcaaaagtcgctgcttgactgcccttattctccttttgatttttgcctttatcctcatc
ggaaggttaatttaccttcagatcaaaaatcaccatttttattccaccctttcacgccac
aatctattaaatattattcccattgaaccgaaccgcggtttgatatttgatcgaaatggc
gtgttgttagccaaggatatcccgacttacatcttaaccatcctccccaatgggacccat
cacttaaacgaaaccataagagaacttactaaaataattcccatttcctccgatgagatt
aaacaatttcatcatatcctctatcaatatcaccgctaccagcccgtcccattaaaatat
aaattaacaaacgaagaggttgcccgtttttatgtaaaccaatatcgatttcccgacgtg
cggattgaaacgcgaatgatgcgttattacccgctcggggacctcaccagcgatgtagtg
ggatacgttggtcgaattaatgcccgagaactgcaaaagataaacaccaacaattacaac
atcgatgacgatatcggcaaaatggggatcgaaaaatattatgaaaacgaactccacggc
acaatgggcgctgaagaggctgaaatcaatgccagtggacggatcgttcgtatattaaaa
agggtaccgcctacaccgggaactaacatctatctcactattgatagcaaccttcagacc
gaagcgagaaaagtcctgggtgaggagagcggtgccatcgttgccatccaacccagcaca
ggacaggtcttggcgttggttaccaagccaagctttgatcccaaccccttcgtctctggc
ttgagccaacaagactatcaaaaattagtaaactcgccacagcaccccctctacaatcga
gcgatccgcggccaatttgcctcgggctcaacggttaaaccttttttagcgcttttcggt
ttggatatgggaattatcaccccacaataccgaatttacgatccggggtggttccaatta
cccaacacccaacatatttatcacgattggcgagaacggggacacggctgggttaacgtc
gtcaaagcgatcgcggtctcttgtgatgtttacttctacaatctagcagtggcgctgggt
attaaacggatggacgatattcttcagcgctttgggtttggccaactaacggggatcgat
ttaccggaagaggtccctgggcttgttccctccccgcgctggaaaatggggacgcaaggc
aaaccttggtataccggcgataccattgaggccggcattggtcagggatttttcctagtt
acccctttgcagctcgcacaagcgacagcgactcttgccgaacacggcaaacgctatcgg
cccacgctgttattcaagagtgtggaacccacgggaaaagtcaacgtccaacagccgatc
cccaaaccccccatttttttgaagaaccctgataattgggatattgttatccatgcgatg
caagaggtggtggataagccgtggggaacagctgatttctttggcagacatcctggtttc
acggtagcggccaaaaccggcactgcccaggtctacgggcaccagcgcgacgaagataaa
agccgcaccaatattcccaagcgcttacgcaacaaccacctttttattgcttttgcgccg
gtcgagaacccgcaaatagccgttgcagtagtggttgaacatagcgcaatggctgataaa
atggcaggagaaatcattaattattacttcaaacatcagcaaaaataa
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