Coxiella burnetii RSA 493: CBU_0670
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Entry
CBU_0670 CDS
T00124
Symbol
rhlE
Name
(RefSeq) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cbu
Coxiella burnetii RSA 493
Pathway
cbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBU_0670 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbu03019
]
CBU_0670 (rhlE)
Enzymes [BR:
cbu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CBU_0670 (rhlE)
Messenger RNA biogenesis [BR:
cbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CBU_0670 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
HI1480
Motif
Other DBs
NCBI-GeneID:
1208557
NCBI-ProteinID:
NP_819700
UniProt:
Q83DM8
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All DBs
Position
610565..611827
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AA seq
420 aa
AA seq
DB search
MCGRFRSYFMSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGK
TAGFTLPLLQRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVV
HGGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPD
IRRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDR
QRKRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT
QFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLV
SGDEVRLLRDIEKLLQSKMPQEVIPGYEPSPFTKAAPVQAVRRARSNQRGKNNGKRARWG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
ttgtgtggccggtttaggagttattttatgtcatttgaagttctcggcttgtcggctgag
ttattacgtgctattcgtgaacaaggttacgttgagcccacacccgttcagcgacaggcg
attccggttatcttgcaagcgcgggacgttatggttactgctcagacgggcactggcaaa
accgcgggatttacattgcctttattgcaacggttatttgtttctcgtccccccttacag
cgttctgctaaacctgtgattcgggcattgattttgacgcccacgcgggaattagctgtg
caagtctttgagtgcgttcgggcctacggtaaatatcttccattgaaagctaccgtagtt
cacgggggcgtgagcatcaagccgcagatcaatcatttgcgacgaggcgtcgatatcctg
gttgccacgccgggccgtcttcttgatttagtcaatcaaggtgttttaaacctatcgcgg
gttgaattcttcgttttagatgaagccgatcgcatgcttgatatgggttttttacctgat
attcgccgaattttgaagctgttgccggaatctcgtcagaatctcttattttcagcgact
ttttcaaaagagattaaagaactcacggataaattattacattcaccggcactgattgaa
gtggcgcgccgcaacacggctgcagcacgcatcacccacgttgttcatcctgttgatcgt
cagcgcaagcgtgaattgctttcgtttatgattggctccaagaactggcggcaggtattg
gtatttacgcgaacaaagcacggggcaaaccgtttgtcacaacaattggagagcgatggg
ttgtcctcagcggcgattcatggcaataaaagccaagcggcacgaatgcgcgcgctcact
cagtttaagcaaggaaaaattcgggtgttagtggccaccgatgtagctgcgcgaggactg
gatatcgataaacttccccatgtaattaactttgagcttccggatgcggcaaaggattac
gtccatcgcgtggggcgaactggtcgggccagtaatgacggcgttgctatttcgttagtt
tctggggatgaagttagattattgagagatattgagaagttgttgcaatctaaaatgccg
caggaagtgattcctgggtatgaacctagcccttttacaaaggcagcgcctgttcaagcg
gtgcggcgtgctcggagtaatcagcgtggaaaaaataatgggaaaagggcgcggtggggt
tga
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