KEGG   Clostridium butyricum: ATN24_00130
Entry
ATN24_00130       CDS       T04197                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cbut  Clostridium butyricum
Pathway
cbut03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cbut00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ATN24_00130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cbut03400]
    ATN24_00130
DNA repair and recombination proteins [BR:cbut03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATN24_00130
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ATN24_00130
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 SWI2_SNF2 AAA_22 DUF87 DUF4288 AAA_5 AAA_16 UFL1
Other DBs
NCBI-ProteinID: ALP88683
UniProt: A0AAP9UCV0
LinkDB
Position
1:complement(32811..34784)
AA seq 657 aa
MGEFKIHSKFKPTGDQPQAIEKLIDSINHDHRGQTLLGVTGSGKTFTMANIIERLQRPTI
VLAHNKTLAAQLCSEFKEFFPDNIVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGNPDEYKKLTLSLRTGMEKERNEIIKKLVEIQY
ERNDIDFSRGTFRVRGDSLDIIPASYSNKGIRIEFFGDEIDRIREFDVLTGSIIGDRNHV
AITPASHFATSKETVDRAIGKIEDELEERLRELNSQDKLLEAQRLRQRTNYDIEMIKEMG
YCSGIENYSRILDGRDSGTPPKTLLDYFPEDFLMFIDESHVTLPQVRAMYAGDRSRKNTL
VDYGFRLPCAYDNRPLKFEEFEKKIKQVVFVSATPSQYELDNSEEIAEQIIRPTGLLDPE
IVIRPVTGQIDDLYGEINKTTERGFRTLVTTLTKRMAEDLTKYLTELGVKTTYMHSEIDT
IERMKIIKDLRTGEFDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSESRVIMYADNITKSMNKAIKETERRREIQTKYNEEHGITPTTIIKDVRDVIEATKV
AEDTAEYKTDENKKLTKKQRDKLIKEYTNEMMLAAKNLQFERAAELRDIIKQLTSNS
NT seq 1974 nt   +upstreamnt  +downstreamnt
gtgggagagtttaaaattcattcgaaatttaagcctacaggtgatcagccacaggctata
gaaaaacttatagattcaataaaccatgatcatagaggccagacacttcttggagtaact
ggatctggaaagacttttactatggctaacattatagagaggcttcagaggccaaccata
gtacttgcacacaataagactcttgcagcacagttatgttctgaatttaaagagtttttt
ccagataatatagttgagtatttcgtatcttattatgattattatcaaccagaagcatat
gtaccacagactgatacttttattgaaaaggatgcatctataaatgatgaaatagataaa
cttcgtcactctgcaacatcggcattgtttgaaagacgtgatgtaataatagtggcatca
gtttcatgtatatatggacttggtaatccagatgaatataaaaagcttacgttgagttta
aggactggaatggaaaaagaacgtaatgagataataaagaaactcgtagaaatacagtat
gagagaaatgatattgatttttcaagaggtacatttagagtaagaggagattctttagat
attattccagcatcatattcaaataaaggcataagaattgaattttttggagatgaaata
gacaggataagagaatttgatgtacttacaggaagtataattggagatagaaatcatgtt
gcaataactccagcttcccactttgctacatctaaagaaaccgtagacagagcaataggg
aaaattgaagatgaacttgaagaaagattaagagaacttaattctcaagataagcttttg
gaagcacaaagactaagacagagaacaaattatgatattgaaatgataaaagaaatggga
tactgtagtggaattgaaaattattcaagaatactagatggtagagattcaggaacacca
ccaaaaactctcttagattacttcccagaagatttcttaatgttcatagatgaaagtcat
gtaacacttccacaggttagagctatgtatgcaggtgatagatcaagaaaaaatacatta
gttgattatggattcaggcttccttgtgcatatgataataggcctttaaagtttgaagaa
tttgaaaagaagataaagcaggttgtatttgtcagtgcaactccttctcagtatgaactt
gataattctgaagaaatagctgaacagataataagaccaactggactccttgatccagaa
attgtaataagaccagtaacaggacaaattgatgatttatatggtgaaataaataaaaca
acagaacgtggattcagaactcttgtaacaacacttacaaaacgtatggcagaagacctt
actaagtatcttacagagcttggagtaaagactacttatatgcactctgagattgacact
atagaaagaatgaaaataataaaagatttaagaactggagaatttgacgtacttgttgga
atcaatcttttaagagaaggacttgatataccagaagttgctcttgttgcaattttagat
gcagataaagaaggatttttaagatctgaaacatcattaatccagacaataggaagagca
gcgagaaattcagagagcagagttataatgtatgcagataatataactaaatcaatgaat
aaggcaattaaagaaacggaaagaagaagagaaattcaaacgaaatataatgaagaacat
ggaataactcctactacaataattaaggatgtaagggatgttatagaagctacaaaagtt
gcagaagatactgcagaatataaaactgacgaaaataagaagcttactaagaaacaaaga
gataagcttattaaagaatatacaaatgaaatgatgcttgcagcaaagaacttacaattt
gagagagcggcagaacttagagacataattaaacagttaacaagtaacagttaa

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