Clostridium butyricum: ATN24_02565
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Entry
ATN24_02565 CDS
T04197
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cbut
Clostridium butyricum
Pathway
cbut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATN24_02565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbut03021
]
ATN24_02565
03400 DNA repair and recombination proteins [BR:
cbut03400
]
ATN24_02565
Enzymes [BR:
cbut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATN24_02565
Transcription machinery [BR:
cbut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATN24_02565
DNA repair and recombination proteins [BR:
cbut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATN24_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF211
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ALP89078
UniProt:
A0A2S7F697
LinkDB
All DBs
Position
1:536830..537777
Genome browser
AA seq
315 aa
AA seq
DB search
MLEIEKPIIECIESNEDGTYGKYVVEPLERGYGITLGNALRRILLSSLPGVAPTSVKIDG
VLHEFSTVQGVKEDVTELILNIKSLALKMNGEGPKVIYIDAKGPGEVTGADIKTDGDVEV
VNKDLHIATLDSDGRLYMELTVNNGRGYVTQNKNKSDDLPISSIAVDSIYTPVKRVNFTV
DNTRVGQITDYDKLTLEIWTNGTIRIDEAISLSAKILIEHFKLFMSLTDNTNDIEVMVEK
EEDKKEKVLEMTVEELDLSVRSYNCLKRAGINTVQELATKSMDDMMKVRNLGKKSLEEVE
RKLKELGLCLKLSEE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaatcgaaaagccaataatcgaatgtatagaatctaatgaagatggtacatat
ggtaaatatgttgttgagccacttgaaagaggatatggtattacattagggaatgcctta
agaagaatattattatcatctcttccaggagtggcaccaacttctgttaagatagatgga
gttttacatgagttttctactgttcaaggtgttaaagaagatgttacagaattaattctt
aacataaaatctttagctttaaaaatgaatggtgaagggccaaaggttatttatattgat
gctaaaggaccaggagaggttactggagctgatataaagactgatggtgatgttgaagtt
gtcaataaggatttacatattgcaactttagattctgatggtagactttacatggaattg
acagttaataatggaagaggttatgttactcagaacaaaaacaagagtgatgatttacca
atttcatcaattgcagttgattcaatctatacaccagtaaaaagagttaattttactgtt
gacaacacaagagttggtcaaattactgattatgataaattaactttagaaatttggact
aatggaacaatcagaatagatgaagctattagtttatctgcaaaaatacttatcgaacac
tttaaattattcatgtcattaacagataatactaatgatattgaagtaatggtagaaaaa
gaagaagataagaaagaaaaagtcctagaaatgactgttgaagaacttgatttatcagtt
agatcatataactgtttaaagagagcaggaataaatacagttcaagaacttgctactaaa
tctatggatgatatgatgaaagtaagaaatctaggaaagaaatctttagaagaagttgaa
agaaagcttaaagaattaggtttatgcctaaagttaagtgaagagtaa
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