Clostridium butyricum: ATN24_03270
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Entry
ATN24_03270 CDS
T04197
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbut
Clostridium butyricum
Pathway
cbut03420
Nucleotide excision repair
cbut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ATN24_03270
03430 Mismatch repair
ATN24_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbut03400
]
ATN24_03270
Enzymes [BR:
cbut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATN24_03270
DNA repair and recombination proteins [BR:
cbut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATN24_03270
MMR (mismatch excision repair)
Other MMR factors
ATN24_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Intein_splicing
UvrD_C_2
Viral_helicase1
AAA_30
AAA_14
ResIII
DUF3553
Hint_2
Motif
Other DBs
NCBI-ProteinID:
ALP89214
LinkDB
All DBs
Position
1:708952..712305
Genome browser
AA seq
1117 aa
AA seq
DB search
MLDLKNLLNKEQYEGATTIEGQVLILAGAGSGKTRVLTHRIAHMVEDLNIAPYNILAITF
TNKAAKEMKDRVRALIGECAENMWISTFHSTCVKILRREIDKIGYKSSFTIYDSSDQKTL
VKECMKTVNINDKDISEQEIISKIGKAKDRMQTARSFKLENESNFRENKIADVYEMYQKR
LKENNALDFDDLIFKTVELFKSNPETLEFYQRKFKYIMVDEYQDTNGAQYELVKLLASKY
KNICVVGDDDQCLVEGTMVSTENKDVEIEKLMKEDLVRVASGNGETSLLKISDINKKKYC
GKIVKITTKNNRVIKATPNHISFGKISLEEDKYYVYLMYKSGFGYRIGQTSSVRSRDDRD
ASGLAVRLNGEQADKMWIIKVCDTKGDATYYEQYYSVKYGIPTIVFNSRGRNITISQEQI
EKMFKEIDTINAAEKLMEDEFLYNEYPHHLSNAVIRGDSIRKRVNLSFFGGKKSVQRGIY
SHRIGLNSSGDDSKNKFIEAGFNVRDGQINTYRVETERDLYDEAEEFARKLSMVEENFEI
LKKAKLSNNKSFMFMPIGSFKPGMSIAVQDNEKIEEDIVISVELEDYDGYVYDLNIDNAR
NYIANGIVVHNCIYQWRGADIKNILDFEKDYPDAKVIKLEQNYRSKGNILNAANVVIVNN
SNRKSKALRTEQELGSKIKVYRAYSDSDEGDFVGKQILDIRKNEDKKYNDFAILYRTNAQ
SRIFEESFRRKGIPYKIVGGTRFYDRKEIKDILAYLKVLINPQDDISIRRIINVPKRSIG
DATVNKIQDFADSFELNMWDALSEVRSIPTLTPRNVSCIDPFVQLMENLMILSETTPVSM
LIETILEDTGYMDQLKKSNEIEDKSRIENLKELVSDAVDFEKNSEDKSLSAYLEKVSLVQ
DTDKIEDEDDSVVLMTVHSAKGLEFPVVFMVGMENGIFPGSASFEKESEMEESRRLCYVG
ITRAKEILFMTSAEVRRVFGKTVAYSQSDFINEIKPDLKEYVSVEKTGIKSRESFINKSS
YNNPHSLRNNMTRTVSGSGLNASRPNSIGSSSIGNISSGDYISVAEATMGRKVMHEKFGV
GTIVSVQNSGDDKKLTIAFDKQGVKVLLLSFAKLKMI
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaaacttacttaataaagaacaatatgaaggggcaactacaattgaa
ggtcaggtattgattttagcaggagcagggtcaggaaaaactagagttttaactcataga
attgctcatatggtagaggacttaaatattgcaccttataatattttagcaattacattt
acaaataaggctgctaaggaaatgaaagacagagttagggcacttattggtgaatgtgct
gaaaatatgtggatatctactttccattcaacatgtgtaaaaattttaagaagagaaata
gataaaataggatataaatcaagttttactatatatgatagttctgatcagaagacatta
gtaaaagagtgtatgaaaactgttaatataaatgataaagatatatcggagcaagaaata
attagtaaaatagggaaagctaaagatagaatgcaaactgcacgaagttttaagcttgaa
aatgaatcaaattttagagaaaacaaaatagctgatgtatatgaaatgtatcagaagaga
cttaaagaaaataatgctttagattttgatgatttaatatttaaaacagtagagttattt
aagagtaatcctgaaacattggaattttatcaaagaaagtttaagtatattatggttgat
gagtatcaggataccaatggtgctcaatatgaacttgttaagcttcttgcatctaaatac
aaaaatatttgtgttgtaggggatgatgatcagtgcttagttgaaggaactatggtttct
acagaaaataaagatgttgaaatagaaaagcttatgaaagaagatttagttagagttgca
tcaggtaatggtgaaacttcattacttaaaataagtgatataaataagaaaaaatattgt
ggaaagatagtaaaaataactacaaaaaacaatagagttataaaagctacacctaatcat
atttcatttgggaaaatatcattagaagaagataaatactatgtttacttaatgtacaaa
agtgggtttgggtatagaataggtcaaacttcatcagtaagatctagagacgatagagat
gctagtggattagctgtaagactaaatggagaacaggctgataaaatgtggataatcaaa
gtttgtgacacaaaaggtgatgcaacttattatgaacagtattattcagtgaaatatgga
ataccgacaatagtatttaattcaagaggtagaaatataacaatctcacaagaacagata
gaaaaaatgtttaaagaaattgatactataaatgcagctgagaaacttatggaagacgaa
ttcttatataatgaatatccacatcatttgagtaatgcagtgataagaggagattctatt
agaaagagagttaatttaagcttttttggaggaaagaagtctgttcaaagagggatatat
tcacatagaataggacttaattcatcgggagatgactcaaaaaataaatttatagaagct
ggatttaatgttagagatggtcaaataaatacatatagagtagaaacggaaagagattta
tatgatgaagctgaggaatttgcaagaaagcttagtatggtggaagagaattttgagatt
ctcaaaaaggcaaagctttctaataataagagttttatgtttatgcctataggaagtttt
aaaccgggaatgtctattgctgtacaagataatgagaaaatagaagaagatattgtaata
tctgttgaattagaagattatgatggatatgtatatgacttaaatattgataatgcacga
aactatattgcaaatggtattgtagttcataattgtatttatcaatggagaggggcagat
ataaaaaatatcttagattttgaaaaagattatcctgatgcaaaggtaataaaattagag
cagaattatagatcgaaaggtaatatattaaatgctgccaatgtagttatagtcaacaac
tcaaatagaaagagtaaggctcttagaactgaacaggaattaggtagtaagataaaggtt
tatagagcttattcagatagcgatgaaggagactttgttggaaaacaaattttagatata
agaaaaaatgaagataaaaagtataatgattttgcaatattatatagaactaatgctcag
tcaagaatttttgaggaaagtttcagaagaaagggaattccttataaaattgtaggagga
actagattctacgatagaaaagaaattaaagatattcttgcttacttaaaggttcttata
aatcctcaagatgatataagtataagaagaattattaatgttccaaagagaagtataggt
gatgcaactgtaaataagattcaagattttgctgatagtttcgagttaaatatgtgggat
gcattaagtgaagtaagaagtattccaacattaacacctagaaatgtatcatgtattgat
ccattcgttcaattgatggaaaacttaatgattttaagtgaaactactccagtttcaatg
cttattgaaacaatattagaagatacaggatatatggatcagttaaaaaagtctaatgaa
atagaagataagagtagaattgaaaacttaaaggaattagtatctgatgcagttgatttt
gaaaaaaatagtgaagataagtcattatcagcatatttagaaaaggtttctttggttcaa
gatacagataaaattgaagatgaagatgatagtgttgtacttatgacagtacatagtgct
aaagggcttgaattcccagtagtatttatggttggtatggaaaatggtatatttccaggt
agtgcttcatttgaaaaagaatcagaaatggaagaatcaagaagattatgttatgttggt
ataacaagagctaaagaaatactatttatgacttcagcagaggtaagaagagtatttggt
aagacagtagcatattctcaatcagattttataaatgagataaaaccagacttaaaagaa
tatgtttcggtggaaaaaacaggaattaaaagtcgagagtcatttataaataaaagttca
tataataatccacacagtttgagaaataatatgactagaacagtttctggaagtgggctt
aatgcaagtagacctaattctattggatcttcttcaataggtaatatatcttcaggtgat
tatatttcagttgcagaagctacaatgggaagaaaagtaatgcatgaaaaattcggagtt
ggaactatagtatcagtccaaaattcaggagatgataaaaaacttactattgcctttgat
aaacaaggagtaaaagtcttgctattatcatttgcaaagcttaaaatgatataa
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