KEGG   Clostridium butyricum: ATN24_05350
Entry
ATN24_05350       CDS       T04197                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03086  RNA polymerase primary sigma factor
Organism
cbut  Clostridium butyricum
Pathway
cbut02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cbut00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ATN24_05350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbut03021]
    ATN24_05350
Transcription machinery [BR:cbut03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ATN24_05350
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_1 Sigma70_r1_2 Exonuc_VII_L Gln-synt_C IF3_C
Other DBs
NCBI-ProteinID: ALP89580
UniProt: A0A3R9KBK4
LinkDB
Position
1:1143282..1144391
AA seq 369 aa
MEQKAKGKAAKTKDDKNDKNVKMSAVKELLDKGKKNGSLTYKEIMEAMDHIDLGPEQIEK
IYEALEMMNIEIIGEANETADAEEEIDLSVPEGIAIDDPVRMYLKEIGKVPLLSSEQEIE
YAQQIEEGNQRAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRK
GYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGRDPFPEEI
SKVMDLPVDKVREIQKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQ
LINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSR
SKKLKDYLD
NT seq 1110 nt   +upstreamnt  +downstreamnt
atggaacaaaaagcaaaaggaaaagctgcaaagactaaggatgataaaaatgataaaaac
gttaaaatgtcagcagttaaagaattattagataaaggtaagaaaaatggatctttaaca
tataaagaaattatggaagctatggatcatatagatttaggtccagaacaaattgaaaaa
atatatgaagcattagaaatgatgaatatagaaattattggagaggctaatgaaacagct
gatgctgaagaggaaatagatttatcagttccagaaggaatagctattgatgatccagta
aggatgtatttaaaggaaataggtaaggttccattattatcttcagaacaagaaatagaa
tatgcacaacaaatagaagaaggtaatcaaagagcaaagaagaaacttgctgaagccaac
ttaagacttgttgtaagtatcgctaaaagatatgttggaagaggtatgttattcttagac
ttaatccaagaaggaaatttaggtcttataaaagctgttgaaaagtttgactatagaaaa
ggatacaaattctctacttatgctacatggtggataagacaggcgataacaagagctatt
gctgaccaagcaagaactataagaattcctgttcatatggttgaaactataaataagctt
ataagagttcaaagacaattattacaagaattaggaagagatccattcccagaagaaatt
tcaaaagttatggaccttccagtagataaggttcgtgaaatccaaaagattgcacaagaa
ccagtatctttagaaactcctataggtgaagaagaagattcacatttaggtgattttata
ccagatgatgaagctccagctccagctgaagcagcagcatttacaatgcttaaagaacag
cttataaatgtacttgatactttgacaccaagggaagaaaaagtattgagattaagattt
ggtttagatgatggaagagcaagaactcttgaagaagttggtaaagaatttaatgtaaca
agagaaagaataagacaaattgaggctaaggctttaagaaaattaagacacccatcaaga
agtaaaaaattaaaagattatttagattaa

DBGET integrated database retrieval system