Clostridium butyricum: ATN24_05350
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Entry
ATN24_05350 CDS
T04197
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
cbut
Clostridium butyricum
Pathway
cbut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ATN24_05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbut03021
]
ATN24_05350
Transcription machinery [BR:
cbut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATN24_05350
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Gln-synt_C
IF3_C
Motif
Other DBs
NCBI-ProteinID:
ALP89580
UniProt:
A0A3R9KBK4
LinkDB
All DBs
Position
1:1143282..1144391
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AA seq
369 aa
AA seq
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MEQKAKGKAAKTKDDKNDKNVKMSAVKELLDKGKKNGSLTYKEIMEAMDHIDLGPEQIEK
IYEALEMMNIEIIGEANETADAEEEIDLSVPEGIAIDDPVRMYLKEIGKVPLLSSEQEIE
YAQQIEEGNQRAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRK
GYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQELGRDPFPEEI
SKVMDLPVDKVREIQKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQ
LINVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSR
SKKLKDYLD
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaagcaaaaggaaaagctgcaaagactaaggatgataaaaatgataaaaac
gttaaaatgtcagcagttaaagaattattagataaaggtaagaaaaatggatctttaaca
tataaagaaattatggaagctatggatcatatagatttaggtccagaacaaattgaaaaa
atatatgaagcattagaaatgatgaatatagaaattattggagaggctaatgaaacagct
gatgctgaagaggaaatagatttatcagttccagaaggaatagctattgatgatccagta
aggatgtatttaaaggaaataggtaaggttccattattatcttcagaacaagaaatagaa
tatgcacaacaaatagaagaaggtaatcaaagagcaaagaagaaacttgctgaagccaac
ttaagacttgttgtaagtatcgctaaaagatatgttggaagaggtatgttattcttagac
ttaatccaagaaggaaatttaggtcttataaaagctgttgaaaagtttgactatagaaaa
ggatacaaattctctacttatgctacatggtggataagacaggcgataacaagagctatt
gctgaccaagcaagaactataagaattcctgttcatatggttgaaactataaataagctt
ataagagttcaaagacaattattacaagaattaggaagagatccattcccagaagaaatt
tcaaaagttatggaccttccagtagataaggttcgtgaaatccaaaagattgcacaagaa
ccagtatctttagaaactcctataggtgaagaagaagattcacatttaggtgattttata
ccagatgatgaagctccagctccagctgaagcagcagcatttacaatgcttaaagaacag
cttataaatgtacttgatactttgacaccaagggaagaaaaagtattgagattaagattt
ggtttagatgatggaagagcaagaactcttgaagaagttggtaaagaatttaatgtaaca
agagaaagaataagacaaattgaggctaaggctttaagaaaattaagacacccatcaaga
agtaaaaaattaaaagattatttagattaa
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