Clostridium butyricum: ATN24_06395
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Entry
ATN24_06395 CDS
T04197
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbut
Clostridium butyricum
Pathway
cbut03030
DNA replication
cbut03410
Base excision repair
cbut03420
Nucleotide excision repair
cbut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATN24_06395
03410 Base excision repair
ATN24_06395
03420 Nucleotide excision repair
ATN24_06395
03440 Homologous recombination
ATN24_06395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbut03032
]
ATN24_06395
03400 DNA repair and recombination proteins [BR:
cbut03400
]
ATN24_06395
Enzymes [BR:
cbut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATN24_06395
DNA replication proteins [BR:
cbut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ATN24_06395
DNA repair and recombination proteins [BR:
cbut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ATN24_06395
NER (nucleotide excision repair)
GGR (global genome repair) factors
ATN24_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ALP89776
LinkDB
All DBs
Position
1:1391671..1394541
Genome browser
AA seq
956 aa
AA seq
DB search
MIEKTIIYNCYEKEDGRMDKEYLLLIDGSSLLSTQYYGNLPREIMFAKTNEEREAFYGKI
MQTSMGIYTNAIYGFMRTFLKILREQKPTHVAVTWDLSRDTFRREIDSDYKGTRGETPSP
LKEQFKLCQEILAKMNVMQFMDSKYEADDFCGSIASKLESEIPVRILTKDTDYLQLVSEN
TKLWLMFTTQEKADDLFKKYEIKKSTANIPDKAFELTPELVKSEYGIKPEQVADLKSLVG
DKSDNIKGVAGVGEASAVPLINEYGTVENLYEHIRNLDKKQEKEIKDYWKTKLGIKRSPL
TYLLKTSDTEIVGEKSAIISKKLAIIKKDIDLGELNRDSLKLNIDIENGNAEFKKLEFKS
LNLKDAISHENEDENNEEKHECNIKINSIDNIEEFSELMNKVKDRIYISYTLNDSSIYSK
LNLKHIIIISEEDISNVIDFEKISREDNIKSIELLKNIMENDKVKKVIHDGKNLVTFLNK
NNITVKEFDFDTAIAAYLLDSAQSKYNLTELIEKYLNKEIDGIESENEGILGSYIPKLYM
ILKSNIEKEKMDKLYYEVEHPLIFVLSSMESIGFNINQSMLDELKIKFDSEIQRTQKEIY
ELADEEFNVSSPKQLGKILFEKLDLPIIKKTKTGYSTNQEVLEKLLDKHEIIPKIMYYRQ
ITKISSTYVEGLKNVIDEDGRIHSNFNQTVTTTGRLSSTDPNLQNIPIRHELGREIRKVF
IPLKEGDTLVSCDYSQIELRVLAHIAGDENMIDAFKHHSDIHTKTASEVFKVPVEDVTSL
MRSRAKAVNFGIVYGISAFSLSQDLKIPKAEAQEYMNIYFERYPKIKSYLENIVSEAEEK
GYVLTILNRRRFIPEINASNKIVKALGERLAMNAPIQGSAADIIKIAMINVYNKLKESKM
QSKLILQVHDELILNVKENEFEEVKKIVVDEMENAIKLSVGLDVDINSGKTWYEAK
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgatagagaaaactattatatataattgttacgaaaaggaagatggaagaatggataaa
gaatacttattacttatagatggatcaagtttgcttagtacacaatattatggaaattta
ccacgtgaaataatgtttgcaaagacaaatgaagaaagagaagctttttacgggaagata
atgcaaacctctatggggatttatactaatgcaatatatggatttatgagaactttttta
aaaatattaagagagcaaaagcctacacatgttgctgttacatgggatttgagtagagat
acattcagaagagaaatagatagtgattataagggaacaagaggggagacaccatctcca
cttaaagaacagttcaaattatgtcaggaaatcttagccaaaatgaatgttatgcaattt
atggacagtaaatatgaagctgatgatttttgtggaagtatagcatctaagcttgaaagt
gaaattccagtaagaatacttactaaggatacagattatttacagctggttagtgaaaat
acaaaattatggctcatgtttacgactcaggagaaagcagatgatttatttaagaaatat
gaaataaaaaagtcaacagctaatattccagataaagcttttgaacttacaccagaactt
gttaaaagtgagtatggaattaaacctgaacaggttgcagatttaaaaagtcttgttgga
gataaatctgacaatataaaaggtgtggctggtgttggagaagcaagtgcagttccactt
ataaatgaatatggaactgttgaaaatttatatgaacatataagaaatcttgacaagaaa
caagaaaaagaaataaaggattattggaagactaaattaggaataaaacgctcaccatta
acatatttgctaaagacaagtgatactgaaattgtgggagaaaaatcagcaattataagc
aaaaagctagcaataataaaaaaagatattgatcttggagaattaaatagggattctcta
aaattaaatatagatatagaaaatggaaatgctgaatttaaaaagcttgaatttaaatct
ctaaatttaaaagatgcaatttctcatgagaatgaagacgaaaataatgaggaaaaacat
gaatgtaatataaaaataaatagtatagataatatagaagaattttcagaacttatgaat
aaagtgaaagatagaatttatataagttatactttaaatgatagttctatttattcaaaa
cttaatcttaagcacataataattattagtgaagaagacataagtaatgttatagatttt
gaaaaaatttctagagaagataatataaaatcaatagagcttttgaaaaatattatggaa
aatgataaagtaaaaaaggtaatacatgatggaaaaaatcttgttacttttctaaataag
aataacataacagtgaaagaatttgattttgatacagctatagcagcatatttattagat
tcagctcaaagtaagtataatttaacagagttaattgaaaaatatttaaataaagaaatt
gatggcattgaatcagaaaatgaaggtattcttggatcatatatacctaaattatatatg
atcttaaaatcaaatatagaaaaagaaaagatggataaactttattatgaggttgagcat
ccattaatatttgtattatcatctatggaaagtataggttttaatattaaccaaagtatg
cttgatgaacttaaaataaaatttgatagtgaaattcaaagaacccaaaaagaaatatat
gaacttgctgacgaagaatttaatgttagctcacctaagcaacttggtaagattttattt
gaaaagcttgatcttccaattataaaaaagactaagacaggatattcaactaatcaagaa
gtattagaaaaacttttggataaacatgaaataataccaaagataatgtattacagacag
ataaccaaaataagttcaacatatgttgaaggtttaaaaaatgttattgatgaagatgga
agaatacattctaattttaatcagactgtaactacaacaggaaggttatcaagtacagat
cctaatcttcagaacataccaataaggcatgagcttggaagagagataagaaaggtgttt
ataccattaaaagaaggtgacactctagtttcatgtgattattctcaaatagaattaagg
gttttagcccatattgcaggtgatgaaaacatgattgatgcatttaagcatcatagtgat
atacatacaaagacagcatcggaagtattcaaagtacctgttgaagatgtaacatctctt
atgagaagtagagctaaagctgttaattttggaatagtatatgggattagtgcatttagt
ttatcacaggatttaaagattccaaaagcagaggcacaagagtatatgaatatatatttt
gaaagatatcctaaaataaagagttacttagaaaacatagtaagtgaagctgaagaaaaa
ggatatgttttaactatattaaacagaagaagattcataccggaaataaatgcatcaaat
aagattgttaaagcattaggtgaaagactagcgatgaatgcgccaatccaaggaagtgca
gcagatataataaaaatagcaatgattaatgtttataataaattgaaagaaagtaagatg
cagagtaaattaatacttcaagttcacgatgaacttattttgaatgtaaaggaaaatgaa
tttgaagaagttaaaaaaatagtagtagatgaaatggaaaatgcaattaagctaagtgtt
ggacttgatgttgatataaactcaggaaagacatggtatgaagctaaatag
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