Clostridium butyricum: ATN24_12000
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Entry
ATN24_12000 CDS
T04197
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cbut
Clostridium butyricum
Pathway
cbut00900
Terpenoid backbone biosynthesis
cbut01100
Metabolic pathways
cbut01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ATN24_12000
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cbut01006
]
ATN24_12000
Enzymes [BR:
cbut01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ATN24_12000
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ATN24_12000
2.5.1.29 geranylgeranyl diphosphate synthase
ATN24_12000
Prenyltransferases [BR:
cbut01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ATN24_12000
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
GTP_EFTU_D4
DUF3180
Motif
Other DBs
NCBI-ProteinID:
ALP91853
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All DBs
Position
1:complement(2666697..2667563)
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AA seq
288 aa
AA seq
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MINNLRKDINDYLDNYFKNKGIYNKVIYDASGYSINIGGKRIRPILFALSYYIYKNEYKN
ILPMACSIEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGENIAVLAGDNLLNEAMILM
MDYSLKNGGNSLKAAYEIASSAGAEGMIGGQVVDVISEGKKISKDELEYMHAKKTGALIR
ASIVGGAVLAGACESDVKILRTYGEKLGLVFQIKDDILDVVGDADVLGKNTHADEEHDKT
NFISVYGLDKCRELCRTISEECVELLKTLTVDSQCLVDLTYDLLNRES
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgataaataatttaaggaaagacataaatgattatttagataattatttcaaaaacaaa
ggtatatataacaaagtaatatatgatgcaagcggctatagcataaatataggaggaaag
agaatacgtccaatattatttgctttatcttattatatttacaaaaatgagtataaaaat
attttaccaatggcatgttcaatagagatgattcatacatattcgcttattcatgatgat
cttccatgtatggatgatgatgatttaagaagaggaaagccaacaaatcataaagtcttt
ggagaaaatattgctgtacttgcaggagataatctccttaatgaagcaatgattttaatg
atggattattctctaaagaatggaggaaactctttaaaagcagcttatgaaatagcatct
tcagctggtgcagaaggaatgataggtggtcaggttgttgatgtaatatctgaaggaaag
aaaatttctaaagatgaacttgagtatatgcacgcaaaaaagacaggagcacttataaga
gcttcaattgtaggtggtgcagtacttgcaggtgcatgtgaatctgatgtaaaaatttta
agaacatatggagaaaaattaggtttagtatttcagattaaagatgatatactagatgtt
gtaggagatgctgatgttctaggcaaaaatacacatgcagatgaagaacatgacaaaact
aattttataagtgtttatggattagataaatgcagagagttatgtagaacaataagcgag
gaatgtgtggagttgcttaaaacattaactgttgattcacaatgtttagtggatttaaca
tatgatcttttaaatagagaaagttag
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