Clostridium butyricum: ATN24_17590
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Entry
ATN24_17590 CDS
T04197
Name
(GenBank) RpiR family transcriptional regulator
KO
K03481
RpiR family transcriptional regulator, glv operon transcriptional regulator
Organism
cbut
Clostridium butyricum
Brite
KEGG Orthology (KO) [BR:
cbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbut03000
]
ATN24_17590
Transcription factors [BR:
cbut03000
]
Prokaryotic type
Helix-turn-helix
Other families
ATN24_17590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
117-like_vir
HTH_38
HTH_11
HTH_Tnp_Tc3_2
HTH_DeoR
HTH_24
HTH_Tnp_ISL3
MarR
Motif
Other DBs
NCBI-ProteinID:
ALR90274
LinkDB
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Position
2:complement(103129..103881)
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AA seq
250 aa
AA seq
DB search
MKIENLIEENYEKLNDNDIYIWNYILHHKKECRTMSIQELASKCNVSHTTILRFTHKLGL
EGYSELKIHLKWEEKGENQFDPKEIDNTCKDIIMTMEELKNRDFNEMFRTIDNADKIYIY
GSGAVQKDAAKELKRNMIFSNKLVYVLEGKEETNIILEALTNKDVFFLLSFSGNNSFVNN
FALKLKAKGITIISINLAGNNELASISNFNIPFYSHSIVIKRKDFKYWTTSQFFVICELL
VLKYIQYSMN
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgagaatttaatagaagaaaactatgaaaaattaaatgataatgatatttat
atttggaattatatattacatcataaaaaagaatgcaggactatgtcaattcaagagcta
gcttcaaagtgcaacgtttctcatacgacaattttacgttttacacataaacttggtctt
gaaggttatagcgaattaaagattcatttaaaatgggaagaaaagggcgaaaatcaattt
gatcctaaagaaattgataacacatgtaaagatataataatgactatggaagaattaaaa
aatcgggattttaacgaaatgtttagaactatagataatgcagataaaatatatatttat
ggttcgggtgctgtacaaaaagatgcagctaaagaattaaaaaggaatatgatattcagt
aataaactagtatatgtgcttgaaggaaaagaagaaactaatattattttagaggcactt
acaaataaggatgtattctttcttctttcattttcaggaaataattcatttgtaaataat
tttgcacttaaattaaaagcaaaaggtataactataatatctataaacctagcaggaaat
aatgaattagcttcaattagtaatttcaatattccattttatagtcattcaattgtaata
aaaagaaaagattttaagtattggactacttctcagttttttgttatatgcgaattattg
gttttgaaatatattcaatatagtatgaattaa
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