Clostridium baratii: U729_1118
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Entry
U729_1118 CDS
T03506
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB, AddB subunit
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cbv
Clostridium baratii
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_1118 (addB)
Enzymes [BR:
cbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U729_1118 (addB)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
U729_1118 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD-helicase
THR4_C
Motif
Other DBs
NCBI-ProteinID:
AIY83035
UniProt:
A0A0A7FVR8
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All DBs
Position
1207087..1210536
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AA seq
1149 aa
AA seq
DB search
MGIRFIYGRAGSGKSRFCLDQIRKKIENNKNNKLVLIVPEQYTFQTENKLLDIVGEKALL
RTEILSFKTMCSRVFEECGGRTHQIMKDEGKSMLIYKLLQEKSDDLKYFNRISRKQGFIE
VVSKTLTEFKKYNISPEILVEELDNLEDDELKDKLIDLTDLYNEYNSRIENNVVDGDDEL
TILKNKLKDCNIYEGAEIWIDEFTTFTPQQLDIISELASKAKTVNITLCMDGNNNTKANE
ETDIFNAIKNTENRIIKLMEENHIGYLEPINLNKEYPYRFKDSEELKHLEKHFFTYPFKI
YSGKNKDIRIYKGNNTYDEVDMIAKDIIRLVRDNGYRYKDISVVCRDINLYEKVMTVIFN
QYEIPYFLDKKIEVLSNPLVILVMSSFEVLLNNWSYEAVFKYLKSGLINIEREYVDRLEN
YILAHGLKGYRWTTEEVNDGFFESDDVNENPNELFIKEIMEEVREPLMNFHSKIKGEKSV
REICSAIYELLIELDVFNKIDEWIEGFKDIGLEAKVREYEQVPAMVIEILDQAVDVIGDD
KLSPREFYKVLNAGFENKEIGVIPVALDQVNIGDIARIKGREVKALYVVGVNDGVLPSAS
KEEGILSDRDRDILKEKGIELASTTRARAFEEQFMVYTALTIPSRYLMITYPMADFEGKS
LRPSIIIPRLKRVLSNVKEESDMFNYADKYDKFSKVTTKVPTFNELILALRKQVDKEEIN
DYWREVFSWYSSHQGFEERTRTIFKGINYSNIGEEIPKDKLRKLYENDNGNLRFSVSRLE
KYAECPFSYFVQYGLKAKDRKIYEFSAPDLGSFMHEILDKFTNKVKNEKILWSELNKDKC
KEIVSELIDIKLKEDNNSILNSTKRYKYFTDRFKRVITKSVSVIAEQMKRGKFEVFRNEF
EFGSMDGGEPIKIDLPSGERVYLTGRIDRIDKIELDGNTYLRIIDYKSGSKEFSLTELYY
GIQMQLLVYLDALLRNSEYILNTGAIPGAILYFKIDDPIIKGNNELDDEEVQNEVLKKLK
MNGLLLKDAKLIRSMDETMETYSLIIPASFKKDGDFSKTSSVATEEQFDILREYVNKKMI
ELCTDMLSGKIKIFPTKNNKKAYCEYCDYSAVCQFDTSIKDNKYRIVLKKSDDEMWKIIT
NEVKGEEDL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgggaattagatttatttatgggagagcgggaagcggcaaaagtagattttgcctagat
caaataagaaaaaagatagaaaataataagaataataaattagtacttatagttccagaa
caatatacattccaaacagaaaataaattacttgatatagtaggagaaaaagccttactt
agaactgaaattttaagttttaagactatgtgtagtagggtatttgaggaatgtggcggt
agaactcatcaaataatgaaagatgaaggaaagagtatgcttatatataagctacttcaa
gaaaaaagtgatgaccttaaatattttaatagaatatcaagaaagcaaggttttatagag
gtagtctcaaaaactttaactgaatttaaaaaatataatatttctccggaaatattagta
gaagaattagataatttagaagatgatgaattaaaagataaactaattgatttaacagat
ctttataatgaatataatagcagaatagaaaacaatgtagttgatggtgacgatgaatta
actatacttaagaataagcttaaagattgcaacatatatgaaggtgcagaaatatggata
gatgaatttacaacatttactccacagcaacttgatataataagcgaattagcatctaaa
gcaaaaacagtaaatattacattatgtatggatggcaacaataatacaaaggcaaacgaa
gaaacagatatatttaatgctataaagaatactgaaaatagaattattaagcttatggaa
gaaaaccatataggatatttagaacctataaacttaaataaagaatatccatatagattt
aaggatagtgaagaattaaagcatttagaaaagcactttttcacttatccatttaaaata
tatagtggaaaaaataaagatataagaatatataagggtaataatacttatgatgaagta
gatatgatagctaaagatataataagacttgttagagataatggatatagatataaagat
atttctgttgtgtgtagagatattaatctatatgaaaaggtaatgacagtcatatttaat
caatatgaaataccatatttcttagataaaaaaatagaagtattgagcaaccctttagtt
atattagtaatgtcttcttttgaagttctactaaataattggtcttatgaagctgtattt
aaatacttgaaaagtggacttataaatattgaaagagaatatgtagataggctagaaaat
tatatattggctcatggattaaagggatataggtggactactgaagaagtaaatgatggg
ttctttgaaagtgatgatgtaaatgaaaatccaaatgaattatttataaaagaaataatg
gaagaagtaagagaaccacttatgaatttccatagcaagattaagggcgagaaatcagtt
agagaaatttgtagtgccatatatgagttgcttatagaattagatgtatttaataaaata
gatgaatggattgaagggtttaaagatattggattagaagcgaaggtacgtgaatatgag
caagttcctgcaatggttatagagatattagatcaagctgttgatgtaattggagatgat
aaactatcacctagagaattttataaagtattaaatgcaggttttgaaaataaagaaata
ggggtgatacctgttgcattagatcaagtaaatataggagatattgcaagaataaaaggt
agagaagttaaggctttatatgttgttggtgtaaatgatggtgtacttccatcagcaagt
aaggaagaaggaatattatcagatagagatagagatatacttaaggaaaaaggaattgaa
ttagcatcaacaactagggctagggcttttgaagaacaatttatggtttatactgcactt
acaataccaagtagatatttaatgataacttatcctatggctgattttgagggtaaatct
ttaagaccatctatcataatacctaggttaaagagagttttaagcaatgtaaaagaagag
agtgatatgtttaattatgctgataagtacgataagttcagtaaagttacgacgaaggtt
ccaacatttaatgaattaatattagcacttagaaaacaagttgataaagaagaaatcaat
gattattggagagaagtatttagctggtatagcagtcatcaaggatttgaagaaagaaca
agaacaattttcaaaggaataaattattcaaatataggtgaagagattccaaaggataag
ttacgtaagttatatgaaaatgataatggtaatttaagatttagtgtttcaagattggaa
aagtatgcagaatgtccattctcatattttgttcaatatggattaaaagctaaagataga
aaaatatatgagttctcagcgccggatttaggttcattcatgcatgagatattagataag
tttactaataaagttaagaatgaaaaaattctatggtcagaattaaataaggataaatgt
aaggagatagtgtcagaacttatagatattaagcttaaagaagataataattcaatttta
aacagtacaaagagatataagtatttcactgatagatttaaaagagtaataactaagtct
gtttcagttatagcagaacagatgaagagaggtaaatttgaggtatttagaaatgaattt
gaatttggttctatggacggtggagagccaataaaaattgatttaccatcaggtgagaga
gtatatcttacaggaagaattgatagaatagataaaattgaactagatggcaacacttat
ttaaggataatagactataaatcaggttcaaaagaatttagtttaacagaactttattat
ggaatacaaatgcaacttttagtatatttagatgcacttttaagaaactctgaatacatc
ttaaatacaggggcaatacctggtgcaatactttattttaaaatagatgatccaattata
aaaggtaataatgagcttgatgatgaggaagtacaaaatgaagttctaaagaagctaaaa
atgaacggactattacttaaggatgctaagcttataagatcaatggatgagactatggag
acatactcacttataataccagcatcatttaaaaaagatggggatttctctaaaactagt
tcagttgcaactgaagaacagtttgatattttaagagaatatgtaaataagaagatgatt
gaactttgtactgatatgcttagtggaaaaataaaaatcttcccaactaaaaataataaa
aaagcttattgtgaatactgtgattattcagctgtttgtcagtttgatacaagtataaaa
gataataaatatagaatagttctaaaaaaaagcgatgatgaaatgtggaagataataact
aatgaagtaaaaggagaggaggatttataa
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