Clostridium baratii: U729_1126
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Entry
U729_1126 CDS
T03506
Name
(GenBank) AAA domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cbv
Clostridium baratii
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_1126
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U729_1126
Archaeal homologous recombinant proteins
U729_1126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
ABC_tran
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIY83012
UniProt:
A0A0A7FTR8
LinkDB
All DBs
Position
1223148..1226270
Genome browser
AA seq
1040 aa
AA seq
DB search
MRPVNLIISAFGPYAKKQELDFQKLNGRNIFVITGTTGAGKTTIFDAISYALYGEASGES
RENDSLRSHFAESDVETFVELDFELRGEVYKIRRSPKQPKKKVRGEGFTEKDAEAVLEMP
NGKVISGVNNVNEKINEILGINKAQFKQIVMLPQGEFKKLLLANSVEREDVFRKIFNTYN
FESIQKSLKEKALNLSKDRNLCKDRMKTHLNNIQGEHNIQIGEYIDFLGVINELNELIAK
EEESYKENESNIKGIKVKLEEKNKEKLIAIQNNEMLIEREQSLKALDELLLKRESIEKSK
ILSDKAKKAKEVSYIEKEYIEKANYLSRKEIEENECNKNIETLKEKQVELQEAVKNEENK
GSYRDKLSEEIGQLKTLEPKIKDYDNIKKLILELEKKSIEIKDLINKKDEETKLLKINKD
KREKELKDISELQLKKVNLDNEVENKTKLINEARDAFKTIDLYEKLKVEHSKIKDKYLKQ
EDIFKKVKHEYEHMEDVYRKEQAGILADSLNDGEECPVCGSLNHPNKAVKGNDNIPTEEE
LKSKKVEFEKYQLESNNIMLELTKINSEANNLLENCNKSLSKLSNDISINPNYDSSSKEE
VKNIGINLKSNIEVLNKERKEIENKINKKEVIESDLSKIDEALNKNEELINSLKESDKDI
YAKLQANKASLEELEKDIPKDIVSVDCLNKTINNKVLELENSKNKLKLVIKNRDESLNML
EGEKAKVKEIIKNIKEASIELNEKNKLFIDSIKTNGFESKEDYIEAKEYIEKIDNLDNEI
ESYNNKLSLMKEKNKELKEKCKDLISRNIDAIDEEIKKIRKEEELKTEEVKNEHSILQNN
KNVLKKVVELNKEFNKKEEEYKVIGELADLANGKKSPYISFERYVLASYFQDIIDAANLR
LEKMTGERFSLKRKTSKSKGAGQKGLELEIYDNYTASSRDVSSLSGGESFKASLSLALGL
SDVVQASSGGVSLETMFVDEGFGTLDPQSLDNAIDSLLELQNGGRLVGIISHVQELKERV
DAKIEVVSTKEGSTANFNIL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtaaatttaattatatcagcatttggaccttatgctaaaaagcaggagtta
gattttcaaaagttaaacggaagaaatatatttgtaattacaggtacgacaggagctgga
aagacaactatatttgatgctataagttatgctttatatggagaagcaagtggtgaaagt
agagaaaatgattctttaagaagtcactttgcagaaagtgatgttgaaacatttgtagaa
ctagattttgaacttaggggagaggtatataagattcgtagaagtccaaagcaacctaag
aagaaagttagaggagaagggtttacagaaaaagatgctgaagctgttcttgaaatgcca
aacggaaaagttataagtggagtaaataatgtaaatgaaaagataaacgagatacttgga
attaataaagctcagtttaagcaaattgttatgcttccacaaggagaatttaaaaaacta
ttattagctaactcagttgaacgtgaagatgtatttagaaaaatatttaatacttataat
tttgaaagtatacaaaaatcattgaaagaaaaagctttaaaccttagtaaggataggaat
ctttgtaaagatagaatgaaaacacaccttaataacatacaaggtgaacataatattcaa
attggtgagtacattgattttttaggagttattaatgagcttaatgaactaattgctaag
gaagaggaatcatacaaagagaatgaatctaatataaagggaattaaagttaaattagaa
gagaaaaataaagaaaaacttatagcaattcaaaataatgagatgttaattgaaagagaa
caatcattaaaagcactagatgaattattacttaaaagggaatcaattgaaaagagcaaa
attttaagtgataaagcaaagaaagctaaagaagtaagttatatagaaaaagaatatata
gaaaaagcaaattatctatcaagaaaagagatagaggaaaatgaatgtaataaaaatata
gaaactcttaaagaaaaacaagtagaattacaagaagcagttaaaaatgaagaaaataaa
ggtagttatagagataaactttcagaagaaattggacagcttaaaactttagaacctaaa
ataaaagactatgataatattaaaaaactaatattagaattagagaaaaagagtatagag
attaaggatttaattaataaaaaagatgaagaaactaaacttcttaaaattaataaagat
aaaagagagaaagaattaaaagatataagtgagcttcaattaaagaaagtaaatttagat
aatgaagtagaaaataaaacaaaacttataaatgaggcaagagatgcttttaagactata
gatttatatgaaaaacttaaagtagagcatagtaaaataaaagataaatatttaaagcaa
gaggatatatttaaaaaggtaaaacatgaatatgagcatatggaagatgtttatagaaaa
gagcaggctggtatattagccgatagtttaaatgatggagaggaatgccctgtttgtggt
tcattaaatcatccaaataaagcagttaaaggtaatgacaatataccaacagaagaagaa
ttaaagagtaagaaggttgaatttgaaaaatatcaattagaaagtaataatataatgctc
gaattaactaaaattaattcagaagctaataacttattagaaaactgcaataaatcatta
agtaaactttctaatgatataagtattaaccctaattatgattcttcttcaaaagaggaa
gttaaaaatataggtattaacttaaaaagtaatattgaagttttaaataaagagagaaaa
gaaatagaaaataaaataaataaaaaggaagttatagaaagtgacctatcaaagatagat
gaagctttaaacaaaaatgaggaattaattaattctttaaaagaaagtgataaagatata
tatgcaaaattacaagcaaataaagcttcattagaggaattagaaaaagatatacctaaa
gatatagtatcagtagattgtttaaataaaacaataaataataaggtattagaacttgaa
aatagtaagaataaattaaaactagtaattaaaaatagagatgaaagtttaaatatgctt
gaaggagagaaagctaaggtaaaagaaataataaagaatataaaagaagcttctatagag
cttaatgaaaaaaataaattatttatagattcaattaaaactaatggatttgagagtaag
gaagactatattgaagctaaagagtatattgaaaaaatagataatttagataatgaaata
gagagttataataataaactttcactaatgaaagaaaaaaataaagagcttaaagaaaaa
tgcaaagatttaatttcgagaaatattgatgctatagatgaagaaattaagaaaataaga
aaagaagaggaattaaagacagaagaagttaagaatgaacattcaatacttcaaaataat
aaaaatgtacttaaaaaggtagtagaacttaataaagaatttaataagaaggaagaagaa
tataaggtaataggagaacttgctgatttagcaaacggaaagaagagtccatatatatct
tttgaaagatatgtattagcatcatatttccaagatataattgatgctgctaatttaagg
cttgagaagatgactggagagagattttcattaaagagaaagactagtaaaagcaagggt
gcaggtcaaaaaggattagaacttgaaatatacgataattatactgcaagttcaagagat
gtaagctcattatcaggaggggaaagctttaaggcttctttatccctagcacttggttta
tcagatgtagttcaagcaagttctggtggggtatcattagaaacaatgttcgttgatgag
ggatttggaacactagacccacaatcattagataatgcaatcgatagtttattagaatta
caaaatggtggacgtttagttgggataatatctcacgttcaagagcttaaagaaagagta
gatgcaaagattgaagtagtatcaacaaaagaagggagtacagctaattttaatatttta
taa
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