Clostridium baratii: U729_1292
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Entry
U729_1292 CDS
T03506
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cbv
Clostridium baratii
Pathway
cbv00470
D-Amino acid metabolism
cbv00550
Peptidoglycan biosynthesis
cbv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U729_1292 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U729_1292 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbv01011
]
U729_1292 (murD)
Enzymes [BR:
cbv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
U729_1292 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbv01011
]
Precursor biosynthesis
Amino acid ligase
U729_1292 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
PipB2_N
Pyr_redox
AlaDh_PNT_C
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
AIY84829
UniProt:
A0A0A7FZ00
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All DBs
Position
1404353..1405732
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AA seq
459 aa
AA seq
DB search
MKKDFGEFKEFIKGKKVGVVGIGVSNIPLINFLVDLGAEVTAFDMKSEEALGDIAKDFKN
KGVKLSLGENYLDNLTGFDVVFKTPSMRIDCDALVRVKEEGAYITSEMEEFVRYCKGKIY
GVTGSDGKTTTTTIISKLLMEEGFKTWVGGNIGTPLFAQIEDIKEEDMVVLELSSFQLMT
MDLPIDVAICTNLAPNHLDMHKDMQEYIDAKKNIFLYGEKDGVLVVNRENDITYGFEKEA
KGEVREFSSKRVLKDGAYYEDGILYLEGKAVCNKKDMVLKGMHNVENYLAAFIATKDDVS
LKSMKKVFETFSGVEHRCEFVRELDGVKYYNDSIASSPTRTLAGLNAFDEKVILIAGGYD
KHIPFEPLAEQGYKFIKELILVGATKGKIKAVFNKLKEEKGISIDMVEVDTFEDAVNKAR
EIAKEGDIVTLSPACASFDMFPNFMERGNKFKELVMNLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagatttcggagaatttaaagaatttataaaaggtaagaaggttggagtagta
ggaataggagtaagtaatatcccacttataaactttttagtagaccttggagcagaggta
actgcatttgatatgaaaagtgaagaagctcttggagatatagctaaagattttaaaaat
aaaggagttaagctttctttaggagaaaattatttagataatttaacaggctttgatgta
gtatttaaaacaccttcaatgagaatagattgtgatgctttagttagagttaaggaagaa
ggcgcatacataacttcagaaatggaagagttcgttagatattgtaaaggaaagatatac
ggagttacaggtagtgatggtaaaacaacaactactactataatatctaagttattaatg
gaagagggatttaaaacttgggtaggtggaaatattggaactccattatttgcacaaatt
gaagacataaaagaagaagatatggtagttttagaattatcaagttttcaacttatgaca
atggatctaccaatagatgttgctatatgcacaaatttagcaccaaatcatttagatatg
cataaggatatgcaagaatatatagatgcaaagaaaaatatattcctatatggagaaaaa
gacggagttcttgttgtaaatagagaaaatgatataacatatggatttgaaaaagaagct
aaaggtgaagttagagaatttagttctaaaagagttttaaaagatggcgcttactatgaa
gatggaatattatatttagaaggaaaagcagtttgcaataaaaaagatatggtcttaaaa
ggtatgcataatgtagaaaattacttagctgcatttatagcaacaaaagatgatgtttca
ttaaagtctatgaaaaaagtatttgaaacatttagtggagttgaacatagatgtgaattt
gttagagaactagatggagttaagtattataatgattcaattgcatcaagtccaacaaga
acattagcaggacttaacgcttttgatgaaaaagttatattaatagctggtggatatgat
aaacacataccatttgaacctttagcagaacaaggatataaattcataaaagaacttata
ctagttggagcaactaaaggtaagataaaagctgtatttaataaattaaaagaagaaaaa
ggaatatcaatagatatggtagaagttgatacttttgaagatgcagtaaataaagcaaga
gaaattgcaaaagaaggggatatagtaactttatcacctgcatgtgcatcatttgatatg
ttccctaactttatggaaagaggaaataagtttaaagaattagttatgaatttaaaataa
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