Clostridium baratii: U729_1654
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Entry
U729_1654 CDS
T03506
Name
(GenBank) phoH-like family protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cbv
Clostridium baratii
Pathway
cbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U729_1654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_1654
Enzymes [BR:
cbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U729_1654
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U729_1654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
PIF1
Helicase_RecD
AAA_22
SLFN-g3_helicase
PhoH
DEAD
AAA
HHH_2
nSTAND3
HHH_3
SRP54
UvrD_C
AAA_12
AAA_28
UvrD-helicase
NPHP3_N
ABC_tran
NTPase_1
AAA_16
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AIY84596
UniProt:
A0A0A7G0F7
LinkDB
All DBs
Position
1739253..1741490
Genome browser
AA seq
745 aa
AA seq
DB search
METIIGVVEAIVFKSDDTGYTVSKINVNKETVTAVGVVPFIKDGQQVKLTGEWIVHKQFG
KQFKIEDFEEILPTKVEAIEKYLSAGIIYGIGPVTAKKIVSHFGEDTLNVMENNIERLME
VDGIGKKKFTIIYESYIEQKDLKDIMMFFQSHGVSNNQCLKIYKKFGANAKEIVSDNPYI
LCKEISGIGFKTADKIAMSLGIKADSPFRIKSGIEYVINGFCAAGNTYMPKERLIQEACD
TLVVDKKIIEENIYNSVLEGRIVAEKVCDEEAVFTLPYYYCELGITNKIITLGIENFQTI
NTDIPHEIEIFEKRYGITLAESQKEAIINAFIEGIEIITGGPGTGKTTIIKCIIDIYEKN
GMKVLLGAPTGRAAKRMSESTGREAKTIHRLLEMGVSDDEDNNKSLFNKGESEPLEADVI
IIDEASMIDVTLMHNLLKAIKLGTRIIIVGDVDQLPSVGPGNVLKDLINSGLIKVVRLRE
IFRQGAESLITVNAHRINSGEMPYLNKKGNDFYFIRENDVDSTLNTIIDLVNRRLPNFNK
DFDKFKDIQVLTPMRKGTLGVLNLNESIQKVLNPESKYKKEKKIKDMIFREGDKVMQTKN
NYSLKWHRVSGEGDEEGVGVFNGDMGFIEKIDEEEKIVTVVFDDEKRVHYDYVYIDELEL
AYAITIHKSQGSEFKVIIIPAFMGSPFLMNRNLLYTGITRAKKLVVVVGMPKALKYMVSN
TQSMERYSALQYRIKDIINNDIIEN
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccattattggcgttgttgaagctattgtttttaaaagtgatgatacaggttat
acagtttctaaaataaatgtcaataaagagactgttacagctgtaggtgttgtcccattt
ataaaagatggtcagcaagttaaattaactggagaatggatagttcacaaacaatttgga
aaacagtttaagatagaagattttgaagaaatattacctacgaaagttgaggctatagaa
aaatatttaagtgcaggaattatatatggtataggacctgtaactgcaaaaaagatagtt
agccattttggtgaagatactttaaatgttatggaaaacaatatagaaagacttatggaa
gtagatggaattggtaagaaaaaatttactatcatatatgaatcatacatagaacaaaaa
gacttaaaagacataatgatgttctttcagtcacatggagttagtaataatcagtgttta
aaaatatataagaaatttggtgcaaatgctaaggagatagtatcagataatccatatata
ttatgtaaggaaatctcaggtataggatttaagacagcggacaaaatagctatgagtctt
ggaataaaggcagattcaccatttagaataaaaagtggaatagaatatgtaataaacggt
ttctgtgcagcaggtaatacatatatgccaaaagaaagactaatacaagaagcatgtgat
actttagttgtagataaaaagataatagaagaaaatatttataattctgttctagaagga
agaattgtagctgaaaaagtatgtgatgaagaggctgtatttacacttccttactattat
tgcgaacttggaataacaaataaaataattacattaggaattgaaaacttccaaacaata
aatacagatatacctcatgaaatagaaatatttgaaaaaagatatggtataacacttgca
gaatcacaaaaagaagcaataataaatgcttttattgaaggtatagaaataataactgga
ggacctggaacaggtaaaacaacaataataaaatgtattattgatatatatgaaaagaac
ggaatgaaagttttactaggggcgccaactggaagagctgcaaaaagaatgagtgaatca
acaggaagagaagctaaaactatacatagacttttagagatgggtgtatcagatgatgaa
gataacaataaatcattattcaataaaggtgagtcagaacctttagaagctgatgtaata
atcatagatgaggcgtcaatgatagatgtaactttgatgcataaccttttaaaagctata
aagcttggaactagaataataatagttggagacgttgatcaattaccttcagttggacca
ggaaatgtcttaaaagatttaataaatagtggactgattaaagttgttaggttaagagaa
atatttagacaaggtgcagaaagtctaataacagtaaatgcgcatagaattaatagtgga
gaaatgccgtatcttaataaaaagggaaatgatttttattttataagagaaaatgatgta
gactcaactttaaatactattatagatttagtaaatagaagacttccaaactttaataaa
gattttgataaatttaaagatatacaagttcttacaccgatgagaaaaggaactttagga
gtacttaatttaaatgaaagtattcaaaaggttctaaaccctgaaagcaagtacaaaaaa
gaaaagaaaataaaagatatgatatttagagaaggggataaagttatgcaaacaaaaaat
aactattctctaaagtggcatagagtttcaggtgaaggtgatgaagaaggtgttggtgta
tttaatggagatatgggatttatcgaaaaaatagacgaagaagaaaaaatagtaacagta
gtatttgatgatgaaaaaagggtacactacgattatgtttatatagatgaattagaactt
gcatatgcaataacaattcataagagccaaggaagtgaatttaaagtaataataatacct
gcatttatgggctcaccatttttaatgaatagaaatcttttatatacaggaataactaga
gctaaaaaattagttgtagttgttggtatgccaaaagctttgaaatatatggtatctaat
actcaaagtatggagagatattcagcgcttcaatatagaattaaagatattataaataat
gatattatagaaaattaa
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