Clostridium baratii: U729_1709
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Entry
U729_1709 CDS
T03506
Name
(GenBank) penicillin binding transpeptidase domain protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cbv
Clostridium baratii
Pathway
cbv00550
Peptidoglycan biosynthesis
cbv01100
Metabolic pathways
cbv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U729_1709
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U729_1709
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbv01011
]
U729_1709
Enzymes [BR:
cbv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
U729_1709
Peptidoglycan biosynthesis and degradation proteins [BR:
cbv01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
U729_1709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF2973
ARM_ECM29
Motif
Other DBs
NCBI-ProteinID:
AIY83330
UniProt:
A0A0A7FWQ6
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All DBs
Position
1793853..1796897
Genome browser
AA seq
1014 aa
AA seq
DB search
MIVNKPKNKKKKISRYKVLYIVMFTIFSLIVVKLAYLQIYKHDDYKDRANQNATRFVAEK
APRGEILDRNGNVLATNKQTYTLTYTSTDEAEKNFYNTMSSVFKILKDNKESVQDDLLLK
IDNNGELYFAYKSSSPDNQQYEKIRFLRDRGMNEKIERKKFGDEKKDLTDDQIAQVDQEL
LAVTPEQAFEYLVKNYSLIGLVDPNPSSDQKKAYDEMDGAELTNLILKKYSKKEIRDYMV
VKDAIKMQSFKGYRSVTITSNINKNTAFIIYQKLNDLPGINVDLQPVRSYPYGTLGSAVL
GYVGQIDSSLESDYKLRGYEPSTDLIGKSGIESAFEDELKGVKGGKTIKVNSKGKETEEL
FKLESYPGNNVNLTIDKNVQYAMQEALKDTINQVRTQNQDSEGQNFPNATRGAALAVDVK
TGKIIALTSYPDFDPNLFAIPGQLTKKQTEQYFAPNFEEFGKEFIKRTGAKKSLDQLFPK
DKNGYRTDPYDLYPRAFYNYATLGTLPPGSIFKPVTALAGLQEGVITPNDTIDATGIFNT
HQDVFGRGFAPHCWIYTQSRGSHGPTNVERALQVSCNFYFYETAYRLYMKEGANIDALDA
IAKYAWKLGLGVDPNSKANPSTGIEIEENTTGQTYNFESMKASMISLANFELADFLEKEN
PSGSDQAMYPANSEKFIPFDFSRSDDDSEKLKALKIDLKNKIKERFEVVGTDKPKSSRDE
FAASILPDVKGIMENSDKYKANVKKYEAKYNKSVSINDQASIVANCIATYVITNKAAEMT
SPAQLVFAAIGQGINHYTPLQLAAYISTLANGGTRYALHLVDSVTDVQGNVVEEFKPKVL
DKIDISKSTLNAIKEGMRRANDEEGGTASSVFSTFPIQTAGKTGTADYSNTQREYGRAPY
ATYVSFAPVDNPEIAFVGVIYDGGHGSYTAPVAKATYEAYFKDELLKKNYTSDSFKKYVL
KAPKDNSEASQKKAQEEAEKKAKEEAEKNKDKKKQDQDKDKDKTKEAKDKAENQ
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatagttaataaaccaaaaaataaaaagaaaaagatctcaagatataaagtactttat
attgttatgtttactatattttctcttatagtggttaagttagcataccttcaaatatat
aagcatgatgactataaagatagagcaaaccaaaatgcaacgagatttgtagcggaaaaa
gcgccaagaggagaaatattagatagaaacggtaatgtattagcaacaaataaacaaact
tatacattaacatatacaagtacagatgaggcagaaaagaatttctataatacaatgtca
agtgtatttaagattctaaaagataataaagaaagtgttcaagatgatttactattaaag
atagataataatggtgaattatactttgcatataaaagttcttctcctgataatcaacaa
tacgaaaagataagattcttaagagacaggggaatgaatgaaaaaatagagagaaagaaa
tttggagatgagaaaaaggatttaacagatgatcaaatagctcaagtagaccaagaatta
cttgctgtaacaccagaacaagcttttgaatatttagttaaaaactattcattaattgga
ttagtagatccaaacccatcatcagatcaaaagaaggcttatgatgagatggatggagct
gaacttactaatttaatacttaaaaagtattctaaaaaagaaataagagactatatggtt
gttaaagatgcaattaaaatgcaaagttttaaaggttatagatcagtaactataacaagt
aatattaacaaaaatacagcgtttataatataccaaaaacttaatgatctacctggtatt
aatgtggatcttcaaccagttagaagttatccatatggaactttagggtcagcagtttta
ggatacgttggacaaatagatagttcattagaatcagactataagttaagaggatatgag
ccatcaacagatcttattggcaaatctggtatagaatcagcttttgaggatgaacttaaa
ggtgttaaaggtggaaaaactattaaagttaactcaaagggtaaagaaacagaagagtta
tttaaacttgaatcttacccaggaaataatgttaacttaacaattgacaaaaatgttcaa
tatgctatgcaagaagcattaaaagatacaataaatcaagttagaacacaaaatcaagat
agtgaaggacaaaacttccctaatgcaacaagaggggcagcacttgcagttgatgtaaaa
actggtaagataattgctcttacaagttatccagattttgatccaaacctttttgcgata
cctggacaacttactaaaaaacaaacagagcaatatttcgcacctaactttgaagagttt
ggtaaagaatttataaagagaactggagctaagaaatctttagatcaattattccctaaa
gataaaaatggatatagaacagatccatatgatttatatccaagagcattctataattat
gcaacacttggtacattacctccaggatctatatttaaaccagttacagcattagctgga
cttcaagaaggtgttataacgccaaatgatactatagatgcgaccggtatatttaatact
catcaagatgtatttggtcgtggttttgcaccacattgttggatatatacacaaagcaga
ggttctcacggaccgactaatgttgaaagagcacttcaagtatcatgtaacttctatttc
tatgaaactgcatatagactttatatgaaagaaggagcaaatatagatgcattagatgca
attgctaaatatgcatggaagttaggacttggtgttgatccaaatagtaaggcaaatcct
tcaactggaatagaaatagaagaaaatacaacaggtcaaacatataactttgaatctatg
aaagcaagtatgataagtcttgcaaactttgaacttgcagatttcttagaaaaggaaaat
ccaagtggatcagatcaagctatgtaccctgctaatagtgaaaaatttataccatttgat
ttttcacgtagtgatgatgattcagaaaaattaaaagctttaaaaatagatttaaagaat
aaaataaaagaaagatttgaggttgttggaacagataaaccaaagtcaagtagagatgaa
tttgcagcttctatattaccagatgtaaaaggtataatggaaaactctgataaatataag
gctaatgtaaaaaaatatgaagctaagtataataaaagtgtaagtataaatgatcaagca
tcaatagttgcaaactgcattgcaacatatgttataactaataaagcggcagaaatgaca
tcacctgcacagcttgttttcgcagctataggtcaaggtataaatcattatactccactt
caacttgcagcatatatttcaacacttgcaaatggtggtactagatatgcacttcattta
gttgatagtgtaacagatgttcaaggaaatgttgttgaagaatttaagcctaaagttctt
gataaaatagatattagtaaatcaacattaaatgcaataaaagaaggtatgagaagagct
aatgacgaagaaggcggtacagcatcatcagtatttagcacattcccaatacaaacagca
ggtaaaacaggtacagccgattactcaaatactcaaagagagtatggtagagcaccatat
gcaacatatgtcagctttgctcctgttgataatcctgaaatagcatttgttggagttata
tacgatggtggtcatggttcatatacagcaccagttgctaaggcaacatatgaggcttac
tttaaagatgaattattaaagaaaaattatacatctgatagtttcaaaaaatatgttcta
aaggcaccaaaagataactcagaagcaagccaaaagaaagcacaagaagaggcggaaaaa
aaggcaaaagaagaagcagaaaagaacaaagataaaaagaaacaagatcaagacaaggac
aaagataaaacaaaagaggctaaagataaggctgaaaatcaataa
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