Clostridium baratii: U729_1994
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Entry
U729_1994 CDS
T03506
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbv
Clostridium baratii
Pathway
cbv03030
DNA replication
cbv03410
Base excision repair
cbv03420
Nucleotide excision repair
cbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U729_1994 (polA)
03410 Base excision repair
U729_1994 (polA)
03420 Nucleotide excision repair
U729_1994 (polA)
03440 Homologous recombination
U729_1994 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbv03032
]
U729_1994 (polA)
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_1994 (polA)
Enzymes [BR:
cbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U729_1994 (polA)
DNA replication proteins [BR:
cbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
U729_1994 (polA)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
U729_1994 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U729_1994 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Cofilin_ADF
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AIY84533
UniProt:
A0A0A7FY56
LinkDB
All DBs
Position
2086493..2089087
Genome browser
AA seq
864 aa
AA seq
DB search
MEKVLILDSNSLMNRAFYALPPTLTNNEGVHTNAIYGFTNMLLKMKEDINPDYIVAAFDK
KAPTFRHEAYGDYKAGRKKMPEELREQFPLVKEMLNLLGINIYELDGFEADDIIGTAAKE
ASKNGMEVYIVTGDKDALQLADDNINVIITKKGVSETAEYNKEAFIKEFEVTPTQFIDVK
GLMGDKSDNIPGVPGVGEKTAFKLIKEYGSVEEVLKNIDNISGKKLKENLENYTEQAIFS
KKLATIMTEVPIDNLLDGIRKKNEINKEGLKELLLNLRMQSSLAKFIGEEEKEEIVINKI
ESLEQLKDSLKDNKTYYIAYDIEESPLNSKRKINDIIFGGEGKAIEFKFKEFYENEKEEV
TKILKEFFEDENKKKVIHDGKSLIKILSMMGIEIKGFEFDTAISAYLIDSSKSEYALSSI
IGTFIGNEVSKDYEGLLEGSTYLKKLYEILTNKIKEENMEELYYNIEHPLIFVLAGMENE
GFKIDTNVLDELQDKFKKEIQIVENEIYEMADEKFNINSPKQLGKILFEKLDLPVIKKTK
TGYSTNADVLDKLRDKHPIIDKITYYRQIAKINSTYVEGMKGLIDVDQSIHTNFNQTVTT
TGRLSSTEPNLQNIPIRYEMGREIRKIFITKEESDKLLSCDYSQIELRVLAHMSGDENMI
NAFKHHSDIHTKTASEVFNVPIDEVTPLMRSRAKAVNFGIVYGISDFSLAQDLNITKKEA
SEYMSIYFDRYPKIKEYLDKVVKDAKETGYVTTIVNRKRFIPEIKSSNKIVKALGERLAM
NAPIQGSAADIIKIAMINVYNRLKEENLQSRLLLQVHDELILNVKEEEISKVEKLVVEEM
ENVMNLSVPLDVDANFGDTWYNTK
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtattgattttggattctaactcacttatgaatagagccttttatgcatta
ccaccgactcttactaataatgaaggagttcatactaatgctatatatggctttactaat
atgcttttaaaaatgaaagaagatataaatccagattatatagtagcagcttttgataaa
aaagctccaacatttagacatgaagcatatggggattataaggcaggaagaaaaaagatg
ccagaagaacttagagaacaatttccgctagttaaggaaatgctaaatcttcttggaatt
aatatatatgaattagatggatttgaagctgatgatattattggaacagctgcaaaagaa
gcatcaaaaaatggaatggaagtttatattgtaactggagataaagatgctcttcaactt
gcagatgataacataaatgttattattacaaaaaagggagtttcagaaactgctgagtat
aataaagaagcgtttataaaagaatttgaagtaactccaactcaatttatagatgttaaa
ggacttatgggagataaatcagataatattccaggggttccgggagtaggagaaaaaact
gcctttaagttaattaaagaatatggttctgtagaagaggttttaaagaatatagataat
attagtggtaaaaaactaaaagaaaacctagaaaactatactgaacaagcaatatttagt
aagaagttagctactataatgactgaagttccaatcgataatttactagatggtataaga
aagaaaaatgagataaataaagaagggcttaaagaacttcttttaaatcttagaatgcaa
tcttctttagctaaatttataggagaagaagaaaaagaagaaatagtaattaataaaata
gagtcattagaacaattaaaagattcattaaaagataacaaaacttattatatagcttat
gatatagaagaatcacctttaaattcaaagagaaaaattaatgatattatatttggaggt
gaaggaaaagctattgaatttaagtttaaagagttttatgaaaatgaaaaagaagaagtt
acaaaaatattaaaagaattctttgaagatgaaaataagaaaaaagtaatacatgatggt
aaatctttaattaaaatattaagtatgatgggtatagaaattaaaggatttgagtttgac
actgctatttcagcatatttaatagactcatcaaaaagtgaatatgcattaagtagtatt
ataggaacatttattggaaatgaagtttcaaaagactatgaaggacttttagagggctct
acatatcttaagaaattatatgaaattcttactaataagattaaagaagaaaatatggaa
gagctatactataatatcgagcatccacttatatttgtattagctggtatggagaacgaa
ggatttaaaattgatactaatgttttagatgaacttcaagataagtttaaaaaagaaatt
caaattgtagaaaatgaaatttatgaaatggctgatgaaaagtttaacataaattcacca
aagcaacttggaaaaattctatttgaaaaattagatttacctgttataaagaaaacaaaa
actggttactcaacaaatgcagatgttttagataaacttagagataaacatcctataata
gataaaataacttattatagacaaattgcaaagattaattcaacatatgttgaaggtatg
aaaggtttaatagatgtagatcaatcaattcatacaaactttaatcaaacagtaacaaca
acaggaaggttatcaagtactgagcctaatcttcaaaatattcctataagatatgaaatg
ggaagagagattagaaagatatttataacaaaggaagaatctgataaacttttatcttgt
gactattcacaaatagaacttagagtattagcacatatgagtggtgatgaaaatatgata
aatgcatttaaacatcatagtgatattcatacaaaaacagcatcagaagtatttaatgtg
ccaatagatgaagttacaccacttatgcgttcaagagcaaaggctgtaaactttggaata
gtatatggtattagtgatttttcacttgcacaagatttaaatataactaaaaaagaagct
tcagaatatatgagcatttattttgataggtatccaaagataaaagaatacttagataaa
gtagtaaaagatgctaaagaaacaggatacgttactacaatcgtaaatagaaagagattt
ataccagagataaaatcttctaataaaattgttaaggcattaggagaaagacttgctatg
aatgcacctatacaaggaagtgcagctgatataataaaaatagcaatgattaatgtatat
aacagattaaaagaagaaaatctacaaagtagacttttattacaagttcacgatgaactt
atattaaatgtaaaggaagaagaaatctctaaagtagagaaattagttgtagaagagatg
gaaaatgtaatgaatttaagtgttccattagatgtagatgcaaactttggagatacatgg
tataacacaaaataa
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