KEGG   Clostridium baratii: U729_1994
Entry
U729_1994         CDS       T03506                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cbv  Clostridium baratii
Pathway
cbv03030  DNA replication
cbv03410  Base excision repair
cbv03420  Nucleotide excision repair
cbv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cbv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    U729_1994 (polA)
   03410 Base excision repair
    U729_1994 (polA)
   03420 Nucleotide excision repair
    U729_1994 (polA)
   03440 Homologous recombination
    U729_1994 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbv03032]
    U729_1994 (polA)
   03400 DNA repair and recombination proteins [BR:cbv03400]
    U729_1994 (polA)
Enzymes [BR:cbv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     U729_1994 (polA)
DNA replication proteins [BR:cbv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     U729_1994 (polA)
DNA repair and recombination proteins [BR:cbv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     U729_1994 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     U729_1994 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 Cofilin_ADF HHH_2 HHH_5
Other DBs
NCBI-ProteinID: AIY84533
UniProt: A0A0A7FY56
LinkDB
Position
2086493..2089087
AA seq 864 aa
MEKVLILDSNSLMNRAFYALPPTLTNNEGVHTNAIYGFTNMLLKMKEDINPDYIVAAFDK
KAPTFRHEAYGDYKAGRKKMPEELREQFPLVKEMLNLLGINIYELDGFEADDIIGTAAKE
ASKNGMEVYIVTGDKDALQLADDNINVIITKKGVSETAEYNKEAFIKEFEVTPTQFIDVK
GLMGDKSDNIPGVPGVGEKTAFKLIKEYGSVEEVLKNIDNISGKKLKENLENYTEQAIFS
KKLATIMTEVPIDNLLDGIRKKNEINKEGLKELLLNLRMQSSLAKFIGEEEKEEIVINKI
ESLEQLKDSLKDNKTYYIAYDIEESPLNSKRKINDIIFGGEGKAIEFKFKEFYENEKEEV
TKILKEFFEDENKKKVIHDGKSLIKILSMMGIEIKGFEFDTAISAYLIDSSKSEYALSSI
IGTFIGNEVSKDYEGLLEGSTYLKKLYEILTNKIKEENMEELYYNIEHPLIFVLAGMENE
GFKIDTNVLDELQDKFKKEIQIVENEIYEMADEKFNINSPKQLGKILFEKLDLPVIKKTK
TGYSTNADVLDKLRDKHPIIDKITYYRQIAKINSTYVEGMKGLIDVDQSIHTNFNQTVTT
TGRLSSTEPNLQNIPIRYEMGREIRKIFITKEESDKLLSCDYSQIELRVLAHMSGDENMI
NAFKHHSDIHTKTASEVFNVPIDEVTPLMRSRAKAVNFGIVYGISDFSLAQDLNITKKEA
SEYMSIYFDRYPKIKEYLDKVVKDAKETGYVTTIVNRKRFIPEIKSSNKIVKALGERLAM
NAPIQGSAADIIKIAMINVYNRLKEENLQSRLLLQVHDELILNVKEEEISKVEKLVVEEM
ENVMNLSVPLDVDANFGDTWYNTK
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggaaaaagtattgattttggattctaactcacttatgaatagagccttttatgcatta
ccaccgactcttactaataatgaaggagttcatactaatgctatatatggctttactaat
atgcttttaaaaatgaaagaagatataaatccagattatatagtagcagcttttgataaa
aaagctccaacatttagacatgaagcatatggggattataaggcaggaagaaaaaagatg
ccagaagaacttagagaacaatttccgctagttaaggaaatgctaaatcttcttggaatt
aatatatatgaattagatggatttgaagctgatgatattattggaacagctgcaaaagaa
gcatcaaaaaatggaatggaagtttatattgtaactggagataaagatgctcttcaactt
gcagatgataacataaatgttattattacaaaaaagggagtttcagaaactgctgagtat
aataaagaagcgtttataaaagaatttgaagtaactccaactcaatttatagatgttaaa
ggacttatgggagataaatcagataatattccaggggttccgggagtaggagaaaaaact
gcctttaagttaattaaagaatatggttctgtagaagaggttttaaagaatatagataat
attagtggtaaaaaactaaaagaaaacctagaaaactatactgaacaagcaatatttagt
aagaagttagctactataatgactgaagttccaatcgataatttactagatggtataaga
aagaaaaatgagataaataaagaagggcttaaagaacttcttttaaatcttagaatgcaa
tcttctttagctaaatttataggagaagaagaaaaagaagaaatagtaattaataaaata
gagtcattagaacaattaaaagattcattaaaagataacaaaacttattatatagcttat
gatatagaagaatcacctttaaattcaaagagaaaaattaatgatattatatttggaggt
gaaggaaaagctattgaatttaagtttaaagagttttatgaaaatgaaaaagaagaagtt
acaaaaatattaaaagaattctttgaagatgaaaataagaaaaaagtaatacatgatggt
aaatctttaattaaaatattaagtatgatgggtatagaaattaaaggatttgagtttgac
actgctatttcagcatatttaatagactcatcaaaaagtgaatatgcattaagtagtatt
ataggaacatttattggaaatgaagtttcaaaagactatgaaggacttttagagggctct
acatatcttaagaaattatatgaaattcttactaataagattaaagaagaaaatatggaa
gagctatactataatatcgagcatccacttatatttgtattagctggtatggagaacgaa
ggatttaaaattgatactaatgttttagatgaacttcaagataagtttaaaaaagaaatt
caaattgtagaaaatgaaatttatgaaatggctgatgaaaagtttaacataaattcacca
aagcaacttggaaaaattctatttgaaaaattagatttacctgttataaagaaaacaaaa
actggttactcaacaaatgcagatgttttagataaacttagagataaacatcctataata
gataaaataacttattatagacaaattgcaaagattaattcaacatatgttgaaggtatg
aaaggtttaatagatgtagatcaatcaattcatacaaactttaatcaaacagtaacaaca
acaggaaggttatcaagtactgagcctaatcttcaaaatattcctataagatatgaaatg
ggaagagagattagaaagatatttataacaaaggaagaatctgataaacttttatcttgt
gactattcacaaatagaacttagagtattagcacatatgagtggtgatgaaaatatgata
aatgcatttaaacatcatagtgatattcatacaaaaacagcatcagaagtatttaatgtg
ccaatagatgaagttacaccacttatgcgttcaagagcaaaggctgtaaactttggaata
gtatatggtattagtgatttttcacttgcacaagatttaaatataactaaaaaagaagct
tcagaatatatgagcatttattttgataggtatccaaagataaaagaatacttagataaa
gtagtaaaagatgctaaagaaacaggatacgttactacaatcgtaaatagaaagagattt
ataccagagataaaatcttctaataaaattgttaaggcattaggagaaagacttgctatg
aatgcacctatacaaggaagtgcagctgatataataaaaatagcaatgattaatgtatat
aacagattaaaagaagaaaatctacaaagtagacttttattacaagttcacgatgaactt
atattaaatgtaaaggaagaagaaatctctaaagtagagaaattagttgtagaagagatg
gaaaatgtaatgaatttaagtgttccattagatgtagatgcaaactttggagatacatgg
tataacacaaaataa

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