KEGG   Clostridium baratii: U729_2772
Entry
U729_2772         CDS       T03506                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
cbv  Clostridium baratii
Pathway
cbv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    U729_2772 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbv03019]
    U729_2772 (rny)
Messenger RNA biogenesis [BR:cbv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     U729_2772 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD KH_KhpA-B KH_NusA_2nd KH_2 Cas3_HD Ribosomal_L17 Serinc DUF5849
Other DBs
NCBI-ProteinID: AIY84219
UniProt: A0A0A7FX63
LinkDB
Position
complement(2858442..2859986)
AA seq 514 aa
MQQIITMIVIDIIVLLILGIVVYKTTKTTSQNKVESLEREAERLVEDAKKDAEAMKKEAI
LEAKEEVHRLRNDLEKDSRERRSEIQRLERRVLQREESLDKKSDFLEKKEEIINGRMNDI
EQLEKEAQELHEQRRGELERVANLSGEEARQIILDEVKREVSHDAAIMIKEIESKAKEEA
EKKAREIITTAIQRCAADHVSETTVHVVALPNDEMKGRIIGREGRNIRTLETLTGVDLII
DDTPEAVILSSFDPIRREVARMALEKLIVDGRIHPARIEEMVERAQKDIENDIKEEGEQA
TLETAVHGLHPELTRLLGRLKYRTSYGQNVLKHSVEVSYLAGLMASELGLDVTLARRAGL
LHDIGKAVDQEQEGPHALIGADLAKKYGESKAVVNAIGAHHGDVEMQSLEAILVQAADAI
SAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIMVKPDQIDDVGSVE
LARNLAKSIEEQLEYPGQIKINVIRETRSIDFAK
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgcaacaaattataacaatgatagttattgatataattgtgctgttaatattaggaata
gtagtttataaaacaacaaaaactacatcacaaaataaagttgagtctcttgaaagggaa
gctgaaagacttgtagaggatgctaaaaaagatgctgaagctatgaagaaagaagctatt
cttgaagcaaaagaagaggttcatagattaagaaatgatttagaaaaagattctcgtgag
agaagaagtgaaattcaaagacttgaaagaagagttttacaaagagaagaatctcttgat
aaaaagagtgattttcttgaaaagaaagaagaaataatcaatggtagaatgaatgacatt
gaacagttagaaaaagaagcacaagaacttcatgaacaaagaagaggagaacttgaaaga
gttgcaaacctttcaggtgaagaagctcgtcaaataatattagatgaagttaagagagaa
gtttctcatgatgctgctattatgattaaagaaatcgaaagcaaggctaaggaagaagct
gaaaagaaagcaagagaaattattactacagcaatacaaagatgtgctgctgatcacgtt
tcagaaactactgtacatgttgtagctttacctaacgatgaaatgaagggtagaataata
ggtagagaaggaagaaacattagaaccctagaaactttaacaggagtagatttaattata
gatgatactccagaggcagtaattttatcaagcttcgatcctataaggagagaagttgct
agaatggcacttgaaaagttaatagtggatggtagaatacatccagcaagaatcgaagag
atggttgaaagagctcaaaaagatatcgaaaacgatattaaagaagaaggagaacaagca
acattagaaacagctgttcatggtcttcaccctgagcttactagattacttggaagatta
aaatacagaacgagctatggtcaaaatgtattaaagcattccgtagaagtttcatattta
gctggtttgatggcttcagaattaggtttagatgttactctagctagaagagcaggttta
ctacacgatataggaaaggccgtagatcaagaacaagaaggaccacatgcactaattggg
gcagatcttgctaagaaatacggtgaatctaaagctgtagtaaatgcaataggagcccat
catggggatgttgaaatgcaatctttagaagctatattggttcaagcagcagatgcaata
tcagcagctagaccaggagcaagaagagaaacattggaggcatatataaagagattagag
aagttagaagaaatagctaactcatatgaaggtgtagaaaagtcatatgccattcaagct
ggtagagagattagaattatggttaaaccagatcaaattgatgatgttggatcagttgaa
cttgctagaaatcttgcaaagagtatagaagagcaactagaatatccaggtcaaataaaa
atcaatgtaattagagaaactagatcaattgattttgcaaaataa

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