Clostridium baratii: U729_2772
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Entry
U729_2772 CDS
T03506
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cbv
Clostridium baratii
Pathway
cbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U729_2772 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbv03019
]
U729_2772 (rny)
Messenger RNA biogenesis [BR:
cbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U729_2772 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
HDOD
KH_KhpA-B
KH_NusA_2nd
KH_2
Cas3_HD
Ribosomal_L17
Serinc
DUF5849
Motif
Other DBs
NCBI-ProteinID:
AIY84219
UniProt:
A0A0A7FX63
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All DBs
Position
complement(2858442..2859986)
Genome browser
AA seq
514 aa
AA seq
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MQQIITMIVIDIIVLLILGIVVYKTTKTTSQNKVESLEREAERLVEDAKKDAEAMKKEAI
LEAKEEVHRLRNDLEKDSRERRSEIQRLERRVLQREESLDKKSDFLEKKEEIINGRMNDI
EQLEKEAQELHEQRRGELERVANLSGEEARQIILDEVKREVSHDAAIMIKEIESKAKEEA
EKKAREIITTAIQRCAADHVSETTVHVVALPNDEMKGRIIGREGRNIRTLETLTGVDLII
DDTPEAVILSSFDPIRREVARMALEKLIVDGRIHPARIEEMVERAQKDIENDIKEEGEQA
TLETAVHGLHPELTRLLGRLKYRTSYGQNVLKHSVEVSYLAGLMASELGLDVTLARRAGL
LHDIGKAVDQEQEGPHALIGADLAKKYGESKAVVNAIGAHHGDVEMQSLEAILVQAADAI
SAARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIMVKPDQIDDVGSVE
LARNLAKSIEEQLEYPGQIKINVIRETRSIDFAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaattataacaatgatagttattgatataattgtgctgttaatattaggaata
gtagtttataaaacaacaaaaactacatcacaaaataaagttgagtctcttgaaagggaa
gctgaaagacttgtagaggatgctaaaaaagatgctgaagctatgaagaaagaagctatt
cttgaagcaaaagaagaggttcatagattaagaaatgatttagaaaaagattctcgtgag
agaagaagtgaaattcaaagacttgaaagaagagttttacaaagagaagaatctcttgat
aaaaagagtgattttcttgaaaagaaagaagaaataatcaatggtagaatgaatgacatt
gaacagttagaaaaagaagcacaagaacttcatgaacaaagaagaggagaacttgaaaga
gttgcaaacctttcaggtgaagaagctcgtcaaataatattagatgaagttaagagagaa
gtttctcatgatgctgctattatgattaaagaaatcgaaagcaaggctaaggaagaagct
gaaaagaaagcaagagaaattattactacagcaatacaaagatgtgctgctgatcacgtt
tcagaaactactgtacatgttgtagctttacctaacgatgaaatgaagggtagaataata
ggtagagaaggaagaaacattagaaccctagaaactttaacaggagtagatttaattata
gatgatactccagaggcagtaattttatcaagcttcgatcctataaggagagaagttgct
agaatggcacttgaaaagttaatagtggatggtagaatacatccagcaagaatcgaagag
atggttgaaagagctcaaaaagatatcgaaaacgatattaaagaagaaggagaacaagca
acattagaaacagctgttcatggtcttcaccctgagcttactagattacttggaagatta
aaatacagaacgagctatggtcaaaatgtattaaagcattccgtagaagtttcatattta
gctggtttgatggcttcagaattaggtttagatgttactctagctagaagagcaggttta
ctacacgatataggaaaggccgtagatcaagaacaagaaggaccacatgcactaattggg
gcagatcttgctaagaaatacggtgaatctaaagctgtagtaaatgcaataggagcccat
catggggatgttgaaatgcaatctttagaagctatattggttcaagcagcagatgcaata
tcagcagctagaccaggagcaagaagagaaacattggaggcatatataaagagattagag
aagttagaagaaatagctaactcatatgaaggtgtagaaaagtcatatgccattcaagct
ggtagagagattagaattatggttaaaccagatcaaattgatgatgttggatcagttgaa
cttgctagaaatcttgcaaagagtatagaagagcaactagaatatccaggtcaaataaaa
atcaatgtaattagagaaactagatcaattgattttgcaaaataa
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