Clostridium baratii: U729_2804
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Entry
U729_2804 CDS
T03506
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbv
Clostridium baratii
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbv03032
]
U729_2804 (topA)
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_2804 (topA)
Enzymes [BR:
cbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
U729_2804 (topA)
DNA replication proteins [BR:
cbv03032
]
Prokaryotic type
DNA Topoisomerases
U729_2804 (topA)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U729_2804 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Peptidase_S7
Motif
Other DBs
NCBI-ProteinID:
AIY84183
UniProt:
A0A0A7FX76
LinkDB
All DBs
Position
complement(2894591..2896684)
Genome browser
AA seq
697 aa
AA seq
DB search
MGQKLVIVESPAKAKTIGKYLGKNYIVEASMGHVRDLPKSKLGVDIDNNFEPKYITIRGK
GELLKSLRKAAKKADKIYLATDPDREGEAISWHLANLLKIDENEDCRIVFNEITKSAVKS
SIKNARKINQDLVDAQQARRILDRLVGYEISPILWKNVKWGLSAGRVQSAALKLICEREE
EIKKFIPEEYWTVDCYLKKGRKKFPIKLSTYKNKKIELKNEDETNNVINALDKDNFLIKE
IKSGSKVKNPMAPFTTSTLQQEASKKLNFMTKKTMSVAQGLYEGVEVKGYGTVGLITYMR
TDSVRISKEAQESAREFILNNYGNEYAPEEFRNYKGKKNIQDAHEAIRPTNIEITPEVAK
KNLTPEQYKLYTLIWKRFVSSQMASCILNTNSITILNGDYKFKASGSTIKFDGFMKIYEY
AISEEDETSLPELSEGEVLSAASLEGKQHFTQPPARYTEASFVKLLEEKGIGRPSTYVPT
ISTILSRDYVQREKKNLVPTELGFIVNNIICEYFKQIADVDFTASMERNLDHIEDGEIEW
KKVVGEFFEPLKHDLEKAEKEMAKVVIEDEVSDVPCDKCGRMMVIKRGRYGKFLACPGYP
ECKNAKPIVEEIKAPCPKCGSKVLAKRSKKGKRFYGCSAYPECDFISWNEPVEKKCPECN
SYMVKKYSKKNGDYLECSNSECKHREEIKTEKEENKE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaaaattagtaatagttgagtcaccagcaaaagcaaaaacaataggaaaatat
ttaggaaagaattatattgttgaagcctcaatgggacacgttagagatttacctaaaagt
aagttaggtgttgatatagataataactttgagccaaaatatataacaataaggggtaaa
ggcgaacttcttaaaagtcttagaaaagcagcaaaaaaagcagataaaatttatcttgca
accgaccctgaccgtgaaggtgaagctatatcatggcatttagcgaatctattaaagatt
gatgaaaatgaagactgtagaatagtttttaacgaaattacaaaaagtgcagttaaaagt
tcaataaaaaatgctagaaaaataaatcaagacttagttgatgcacaacaagcaagaaga
atattagatagacttgttggttatgaaataagtccaattctttggaaaaatgtaaaatgg
ggattaagtgcaggtagagtacaatcagcagcgcttaaacttatttgcgaaagagaagaa
gagattaaaaaatttattccagaagaatattggacagttgattgttatttaaaaaaagga
agaaaaaaattcccaataaaactttcaacatataaaaataaaaagatagaacttaaaaat
gaagatgaaacaaataatgttataaatgctttagataaagataattttttaattaaagaa
attaaaagtggaagcaaggtaaagaatcctatggctccatttacaactagtacacttcaa
caagaagctagtaaaaagttaaactttatgactaaaaaaacaatgtcagttgcacaaggt
ttatatgaaggtgttgaagttaaaggttatggtacagtcggacttataacttatatgaga
acagattcagttagaatatcaaaagaagcacaagaaagtgctagagagtttatattaaat
aattatggaaatgagtatgcacctgaagaatttagaaattataaaggtaagaaaaatata
caagatgcgcacgaagctataagacctacaaatattgaaattacaccagaagttgcaaag
aaaaatttaactccagaacaatataagttatatactcttatatggaaaagatttgtttct
tcacaaatggcatcatgtatattaaatacaaattcaataactatattaaatggagattat
aaattcaaagctagtggatctacaataaaatttgatggatttatgaagatttatgaatat
gcaataagtgaagaagatgaaacatctcttccagaactttcagaaggtgaagttttaagt
gctgcatcactagaaggtaaacaacattttactcaaccacctgcaagatatacagaggca
tcatttgttaaattattagaagaaaaaggaataggaagaccaagtacttatgttcctaca
atttctacaatattaagtagagattatgttcaaagagaaaagaaaaatttagttccaaca
gaattaggttttatagtaaataacataatatgtgaatactttaaacaaattgctgatgtc
gatttcacagctagtatggaaagaaatttagaccatattgaagatggtgaaattgaatgg
aaaaaagttgttggagaattctttgaaccattaaaacatgacttagaaaaagctgaaaaa
gaaatggctaaagtagtaatagaagatgaagtaagtgatgttccatgtgataaatgtgga
agaatgatggtaataaaaagaggacgttatggtaaattccttgcatgccctggatatcca
gaatgtaaaaatgctaaaccaattgttgaagaaataaaagcaccttgtcctaagtgtggt
agcaaagttttagcaaagagaagtaaaaaaggaaagagattttatggatgttcagcttat
ccagaatgtgactttataagttggaatgaacctgttgaaaagaaatgtccagaatgtaat
tcttatatggttaaaaaatattctaagaaaaatggtgattacttagaatgttcaaatagt
gaatgtaagcatagagaagaaattaagactgagaaggaagaaaataaagaatag
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