Clostridium baratii: U729_2937
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Entry
U729_2937 CDS
T03506
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbv
Clostridium baratii
Pathway
cbv00260
Glycine, serine and threonine metabolism
cbv00460
Cyanoamino acid metabolism
cbv00630
Glyoxylate and dicarboxylate metabolism
cbv00670
One carbon pool by folate
cbv00680
Methane metabolism
cbv01100
Metabolic pathways
cbv01110
Biosynthesis of secondary metabolites
cbv01120
Microbial metabolism in diverse environments
cbv01200
Carbon metabolism
cbv01230
Biosynthesis of amino acids
cbv01240
Biosynthesis of cofactors
cbv04981
Folate transport and metabolism
Module
cbv_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U729_2937
09102 Energy metabolism
00680 Methane metabolism
U729_2937
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U729_2937
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
U729_2937
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
U729_2937
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
U729_2937
Enzymes [BR:
cbv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
U729_2937
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AIY83773
UniProt:
A0A0A7FW23
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All DBs
Position
complement(3032176..3033411)
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AA seq
411 aa
AA seq
DB search
MNFDQISKNDNEVYSLIEKELERQENGIELIASENFASEAVMEAMGSYLTNKYAEGYPGK
RYYGGCYVVDEIEDIARERAKKLFGAEHANVQPHSGSQANMAVYFTILEPGDTVLGMDLS
HGGHLTHGSPVNFSGKLFNFVSYGVSKETEVIDYDEVRRIALECKPKLIVAGASAYSREI
DFKKFRDICDEVGAYFMVDMAHIAGLVAAGYHMSPIEYADFVTTTTHKTLRGPRGGLILC
KEKYAKALDKNIFPGMQGGPLMHIIAAKAVCFKEALDPSFKDYIEKVINNCKVLGDELVK
HGFKLVSGGTDNHLILVDLSNKDITGKEAEHLLDSIGITLNKNTVPNETKSPFVTSGVRI
GTAAVTTKGYDEEDMKEIASIINDVIESREEGSEELRNRVLKLSSKHKMYR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgatcaaatatcaaaaaatgacaacgaagtatattctcttatagagaaagaa
cttgaaagacaagaaaatggaattgaacttattgcatcagagaattttgcaagtgaagca
gtaatggaagctatgggatcatatttaacaaataaatatgcagaagggtatccaggaaag
agatattatggtggttgctatgtagtagatgaaatagaagatatagcaagagaaagagcg
aagaaattatttggtgctgaacatgcaaatgttcaaccgcattcaggatctcaagctaat
atggctgtatattttacaatattagaaccgggagatactgttcttggaatggatttaagc
catggaggacatttaactcatggatcacctgttaatttttcaggtaaattatttaacttt
gtatcttatggagtatcaaaagaaactgaagtaattgattatgatgaagttagaagaata
gcactagaatgcaaaccaaaacttattgttgcaggggcaagtgcatattctagagaaata
gattttaaaaagtttagagacatatgtgatgaagttggggcttacttcatggtagatatg
gctcacattgctggacttgttgcagcaggataccacatgtcacctattgaatatgcagat
tttgtaacaacaactactcataagactttaagaggaccaagaggcggactgatactttgc
aaagaaaagtatgctaaggcattagataaaaatatattcccaggtatgcaaggtggacca
cttatgcatattattgcagctaaagctgtatgttttaaagaagctttagatccaagtttt
aaagattatatagaaaaagttataaataactgtaaggttttaggcgatgaacttgtaaaa
catggatttaaacttgtatctggaggaactgataatcatttaatattagttgatttaagt
aataaagatataacaggaaaagaagctgaacatcttttagattcaataggaattacttta
aataaaaatactgtaccaaatgaaactaagagtccatttgtaacatcaggtgttagaatt
ggaactgcagcagttacaactaaaggatatgatgaagaagatatgaaagaaattgcatct
ataattaatgatgttatagaaagcagagaagaaggctcagaagagttaagaaacagagtc
ttaaaattaagttcaaaacataaaatgtatagataa
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