Clostridium baratii: U729_3185
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Entry
U729_3185 CDS
T03506
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
cbv
Clostridium baratii
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbv03032
]
U729_3185 (hup)
03036 Chromosome and associated proteins [BR:
cbv03036
]
U729_3185 (hup)
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_3185 (hup)
DNA replication proteins [BR:
cbv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
U729_3185 (hup)
Chromosome and associated proteins [BR:
cbv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
U729_3185 (hup)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
U729_3185 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
HU-DNA_bdg
DUF4355
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AIY85280
UniProt:
A0A0A7G2M4
LinkDB
All DBs
Position
pCBJ:complement(113717..113995)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKGQFVDFITENNKEITKKEAENIIKIFTDSIEKALEQGETVNLIGFGSFGVRERAARE
GRNPRTKEVIKIEACNTPFFKPGKSFKEKVNK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggacaatttgtagattttataacagaaaacaataaagagattactaaaaag
gaagctgaaaatattataaaaatatttactgattctatagaaaaagctttagagcaaggc
gaaactgtaaacttaatagggtttggatcatttggcgttagagaaagagctgcaagagaa
ggtagaaatcctagaactaaagaagtgataaaaatagaagcttgtaatactccattcttt
aaaccaggaaaatcatttaaagaaaaagtaaacaaataa
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