Clostridium baratii: U729_3200
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Entry
U729_3200 CDS
T03506
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbv
Clostridium baratii
Pathway
cbv03420
Nucleotide excision repair
cbv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U729_3200
03430 Mismatch repair
U729_3200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_3200
Enzymes [BR:
cbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U729_3200
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U729_3200
MMR (mismatch excision repair)
Other MMR factors
U729_3200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AIY85317
UniProt:
A0A0A7G0H3
LinkDB
All DBs
Position
pCBJ:complement(124690..126543)
Genome browser
AA seq
617 aa
AA seq
DB search
MKLNEKQLNAVTKSIDKNTLLLAGPGSGKSSTLAERTKYIVNELKVNEENIMIITFTVKA
ANELKKKIKDKVKDYDKITIGTFHSVCLNLLKKFKKDLYFKKLSVLSSTESGDMLRKALA
NEGAICDSHTFKDYKSEISILKGNLKSSTHLMKRFTCDEEHQFATVYERYQRLLIKDSLV
DYDDIIMYTVTLLRTSKRALDYCRNKFKYIMCDEVQDCNYAQFKFLQLIYEGNNLFLVGD
EAQAIYGFRGTSPEYMIEFQKNFKNTQILELNQNYRSTKIIVKACDALINHSSKGFIKNS
VTENEYGYPIIVKKCKNSTDEAYFVKAMIEKAKENSDAKYSDFCVLYRNNKQCEVIKTVF
RKNKIPYNVKGDNIFYSYMEIKNILTIIKFAVNRQDKRYFKNVAELIPGTNDTVIDSAVA
KARLEQIDYLTALKTCRVETGFINEVNKFIELVNIYNKVKPYIYIKNVADYLKERVYKCN
WSTKELENIKDLIHLCDTHCTENNASINEFIDYVTVNLPQPTRRKIDCVTLSTVHSSKGL
EYTNVFLIGADNKTFCKYSNESKTDENRRLFYVALSRAKKKVYISYSILKKTKHMTDTLK
ATEFISEIPSKYLAYSD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatgaaaaacaattaaatgctgttactaaaagtatagataaaaatacatta
ttacttgcaggtccaggtagtggaaaaagttcaacattagctgaaagaactaaatatata
gttaatgaacttaaagtaaatgaggaaaatataatgataattacatttactgttaaagca
gctaatgaacttaaaaagaaaattaaagataaggttaaagactatgacaaaataactatt
gggacttttcatagtgtatgtcttaatttactaaagaaattcaagaaagacttatatttt
aaaaagctttctgttttaagctctactgaaagcggagatatgctaagaaaagctttagct
aatgaaggagctatatgtgattctcatacttttaaagattataaatctgaaataagtata
ttgaaaggaaatttaaaaagcagtacacatttaatgaagaggttcacttgtgatgaagaa
catcagtttgcaactgtatatgaacgttatcaaagattactaataaaagattctttggtt
gattatgatgacataattatgtatacagttactttactaagaaccagtaaaagagctttg
gattactgtagaaataaatttaaatatattatgtgtgatgaagtacaagactgtaattac
gctcaatttaagttcctacaactaatatacgaaggaaataacctattcctagtaggtgac
gaagcacaagcaatttatggctttagaggcacaagcccagaatatatgatagagttccaa
aagaattttaaaaatactcaaattttagaactaaatcaaaactatagatcaacaaaaatt
atagttaaggcttgtgatgctttaataaatcatagttcaaagggatttataaaaaattcc
gttactgaaaatgaatatggttatcctattatagttaaaaagtgcaaaaattcaactgat
gaagcttattttgttaaggctatgatagaaaaagcaaaagaaaatagtgatgctaagtat
agtgatttttgcgttttatatagaaataataagcaatgtgaagttattaaaacagtattc
agaaagaataaaataccttataatgtaaaaggagataatattttctattcttatatggaa
ataaaaaatattcttactatcattaaatttgctgttaacaggcaagataaaaggtatttt
aaaaatgtagctgaacttataccaggtacaaatgatacagttattgattctgctgtagct
aaagcaagattagaacaaattgattatcttacagctttaaaaacttgcagagttgaaact
ggttttattaatgaagttaataagttcattgaacttgttaatatatataacaaagttaaa
ccctacatctatattaaaaatgttgcagattatttaaaagagagagtttataaatgtaac
tggtctactaaggaattagaaaacatcaaggatttaattcatttatgtgatactcattgt
acagaaaacaatgcaagtataaatgaatttatagactatgttactgtaaatttacctcaa
cctactagaagaaaaatagattgcgttacattatctacagttcattcttctaaaggtctt
gaatatactaatgtatttttaataggagctgacaacaaaacattttgtaaatacagtaat
gaaagtaagacggatgagaatagaagattattctatgttgcattatcaagagcaaagaaa
aaagtctatatatcctactctattttgaagaaaactaagcatatgaccgacactttaaaa
gcgacagagttcataagcgagattccttctaaatatttagcttattcagactaa
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