Clostridium baratii: U729_373
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Entry
U729_373 CDS
T03506
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbv
Clostridium baratii
Pathway
cbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U729_373 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbv03019
]
U729_373 (recQ)
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_373 (recQ)
Enzymes [BR:
cbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U729_373 (recQ)
Messenger RNA biogenesis [BR:
cbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U729_373 (recQ)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U729_373 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
FlbT
ARMH5
Motif
Other DBs
NCBI-ProteinID:
AIY84515
UniProt:
A0A0A7G013
LinkDB
All DBs
Position
complement(393420..395192)
Genome browser
AA seq
590 aa
AA seq
DB search
MNNTQRAYYALKKFYGYDSFREGQLEIINKILNKIDSFILMPTGGGKSICYQIPSIIFEG
ITLVISPLISLMKDQVDSLKESGINGIYINSSLKSEEIKEILKDASLGLYKIIYISPERL
ESNYFKNIIKDLNICHIAIDEAHCVSEWGHDFRKSYRYIKPFYESLKNRPVISAFTATAT
KEVREDAIKLLGLNNPYEYLGDINRSNLNIDILKEVDKEEELKTIIRSHEDESGIVYCMS
RKEVDIIYSRLNDIGYSVLKYHAGMREEDKEKSQEDFLFERKNVMIATNAFGMGIDKSNV
RFIVHASIPKNLETYYQEIGRGGRDGEQCDCYLFYSRDDIRRVEFLINKSSGINRREIAL
RKLQEMVEYAESKDCYRNYLLKYFGNKYITDFCNNCSNCLNSDEIKDFTREAQIILSTIF
RTRERFGISVLIDILRGIKGPKVINYELDKVTTYGLMKEYSSNFIKSIIKNLLELKYIDL
KPGTYSMLILNNRSMKVLKSEEKVFMKLEKMEDEVINKDIYNALKSWRKIKAIKENIRPY
IIFSDRTLIDISNIKPENKESLMNIRGMGEKKLQKYGEEILELIRDMNKN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaataatactcaaagagcatattatgcattaaaaaagttttatgggtacgatagtttt
agagaaggccaattagagataataaataaaattttaaataaaatagattcttttatatta
atgccaactggtggtggaaaatctatatgttatcaaattccatcaataatatttgaaggg
ataacattagttatatcaccacttatttcacttatgaaggatcaggtggatagtttaaaa
gaaagtggtattaacggtatatatataaacagttctttaaaaagtgaagagataaaagag
attttaaaagatgcatcacttggactttacaagataatatatatatcaccagaaagactt
gaatctaattattttaaaaacataattaaagatttaaatatatgtcatattgctatagat
gaagctcattgcgtatcagaatggggacatgattttagaaaaagctatagatatataaaa
cctttttatgagagtttaaaaaatagaccagttatatctgcatttacagcaacggcaact
aaagaagtaagagaagatgcaattaaacttttaggacttaataatccgtatgaatattta
ggagatataaacagaagtaatttaaatatagatattttgaaagaagtagataaagaagaa
gagttaaaaactattataagaagtcacgaagatgaatcaggaatagtctattgcatgtca
agaaaagaagtagacataatatatagcagattaaatgatataggatatagtgttcttaaa
taccatgctggaatgagagaagaggataaagaaaaatcacaagaagattttttatttgaa
agaaaaaatgtaatgattgcaacaaatgcttttggaatgggaatagataaatcaaatgtt
agatttatagttcatgcatcaattcctaaaaatttagaaacttattatcaagagataggg
agagggggaagagatggtgaacagtgtgattgctatttattttactcaagggatgatata
agaagagttgaatttttaataaataaaagcagtggtataaatagaagagaaatagctctt
agaaaacttcaagaaatggttgaatacgcagaaagtaaagattgttataggaactattta
ttaaagtattttggaaataaatatataacagatttttgtaataattgttctaattgttta
aatagtgatgagataaaagattttactcgtgaagctcaaataatattatcaactatattt
agaactagagagagatttggaatatcagtattaattgatattttaagaggaataaaagga
ccaaaggttattaattatgaattggataaagttacaacatatggacttatgaaagaatat
agttcaaactttataaaaagtataataaagaatcttttagaattaaaatatatagattta
aagccaggaacatactcaatgctaattttaaataatagatcaatgaaggttttaaaatct
gaagaaaaagtttttatgaagcttgagaaaatggaagatgaagttataaataaagatata
tataatgctttaaaatcttggagaaagattaaagcaataaaagaaaatataaggccatat
ataattttttcagatagaacattaatagatatttctaatataaaaccggaaaataaagaa
agtcttatgaacataagaggaatgggagagaagaaacttcaaaaatacggagaagaaata
ttagaattaataagagatatgaataaaaattaa
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