Clostridium baratii: U729_57
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Entry
U729_57 CDS
T03506
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cbv
Clostridium baratii
Pathway
cbv03030
DNA replication
cbv03430
Mismatch repair
cbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U729_57 (holA)
03430 Mismatch repair
U729_57 (holA)
03440 Homologous recombination
U729_57 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbv03032
]
U729_57 (holA)
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_57 (holA)
Enzymes [BR:
cbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U729_57 (holA)
DNA replication proteins [BR:
cbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U729_57 (holA)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U729_57 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AIY84941
UniProt:
A0A0A7G1S8
LinkDB
All DBs
Position
complement(53938..54972)
Genome browser
AA seq
344 aa
AA seq
DB search
MINYETLEKDIKLKKIKNSYVFCGPDEELIKESIGKLIKPYIDDSLMDLNFIKFDGVQCT
FDEVMNACETLPFMAEKKVVLIYRCAFLNDKLDAQSKSFYKEMKEYLKDMPEQTILIMYY
VFKDKRDTAKKNKNIMGLDKLTTVVQVDKLKRDGFYKRVELMFKENNRSINKVQLRYFCE
KLPMNLHIARQEVEKISDYTLGREIDKKDIDLLIPNKSEDDVFDLVDLISQRKIEKAVDI
LNELLFKAEQHMLIIITIENQFKRLYDIKIGLLKGKNVQDFMKEFRIPQFVVEKLIQQSK
KFSLKQLEKILRLCIETENKLKSSTIDKKGELEIFLLSIAMVKK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgattaattatgaaacattagagaaggacataaaattaaaaaagattaaaaattcgtat
gtattttgtggaccagatgaagaacttataaaagaaagtataggtaagttaataaagcct
tatatagatgatagtcttatggatttaaattttataaagtttgatggggtacagtgtacc
tttgatgaggttatgaatgcttgtgaaacattaccttttatggcagaaaagaaggtcgtt
ttaatttatagatgtgcatttttaaatgataaattagatgcacaaagcaaaagtttttat
aaggaaatgaaagaatatctaaaagatatgccagaacaaacaatacttattatgtattat
gtttttaaagataaaagagatactgctaaaaagaataaaaacataatggggcttgataag
ttaactacagtagttcaagttgataaattaaaacgtgatggattctataaaagagttgaa
ttaatgtttaaagaaaataatagaagtataaataaagttcaacttagatatttttgtgaa
aaactccctatgaatcttcatatagcaagacaagaagttgaaaaaatatcagattataca
ttaggtcgtgaaatagataaaaaagatatagatcttttaattccaaataaaagtgaagat
gatgtttttgatttagtggatctaatatcacaaaggaaaatagaaaaagcagttgatatt
ttaaatgaacttttatttaaagcagagcaacacatgttaataataataactatagaaaat
cagtttaaaagactatatgatataaaaattggacttttaaaaggtaagaatgttcaagat
tttatgaaagaatttagaataccacaatttgttgttgagaagttaatacaacaaagcaag
aaattttctttaaaacaactagaaaaaatattaagattatgtattgaaacagaaaataaa
ttaaaaagtagtactatagataaaaaaggagaattagaaattttccttttatcaattgct
atggtaaagaaataa
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