Clostridium baratii: U729_606
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Entry
U729_606 CDS
T03506
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cbv
Clostridium baratii
Pathway
cbv00300
Lysine biosynthesis
cbv00470
D-Amino acid metabolism
cbv01100
Metabolic pathways
cbv01110
Biosynthesis of secondary metabolites
cbv01120
Microbial metabolism in diverse environments
cbv01230
Biosynthesis of amino acids
Module
cbv_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U729_606 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U729_606 (lysA)
Enzymes [BR:
cbv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
U729_606 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AIY84964
UniProt:
A0A0A7FZB5
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All DBs
Position
complement(654938..656233)
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AA seq
431 aa
AA seq
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MKLFGTMKTEENSLVVGGIKATKLVEQYGTPLYVMDEEFLRNNCREYYSSFKCGSRGNKV
AYAGKAFLTLAMCNLINEEGLYLDVVSGGELYTAYKAGFPLDKVLFHGNNKTLEEIDMGV
RLGVGTFVVDNLYEIEQLNQKAKEQDRIQNIYLRITPGIEAHTHEYIKTGQIDSKFGFAP
IGDNIINAINRAIKLKNVNLRGLHCHIGSQIFEIEPYEEAAEVMIKLMKRIEDKTGYLIE
ELDLGGGFGIYYSKDDSPKETKEYCEAILNKVDNVCKEVGLKTPTLVIEPGRSIVGNTGL
TLYTIGSIKNIPSIRKYVSVDGGMTDNIRPALYNAQYECIVANRVIYESKEKVTISGKCC
ESGDILLEGIKIPSVLSGDLLAVMSTGAYGYSMANNYNKIPRPAVVMVRDGESRVICKRE
SYEDMIRNEVG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatttggtactatgaaaacagaggaaaattctttagtggttggaggaataaag
gctacaaagttagtagaacaatatggaactcctttgtatgtaatggatgaagaattttta
agaaataattgtagagaatattatagctcatttaaatgtggtagtagaggaaataaagta
gcatatgcaggaaaagcgtttttaactcttgcaatgtgtaatttaataaatgaagaggga
ttatatttagatgtagtttcaggtggagaactttatacagcatataaagctggattccca
cttgataaggtactatttcatggaaataataaaacattagaagaaattgatatgggggta
cgtcttggtgttggaacttttgttgttgataacctttatgaaatagaacagttaaatcaa
aaggcaaaagaacaagatagaattcaaaatatttatttaagaataacaccaggaattgaa
gctcatactcatgagtatataaagactggacaaatagactcaaagtttgggtttgcacca
attggagataatattataaatgcaattaatagagccataaaattaaaaaatgttaattta
cgtggtcttcattgtcatataggatcacaaatttttgagattgaaccttatgaagaggct
gctgaagtaatgataaaacttatgaaaaggatagaggataaaacaggatatctaattgaa
gaattagatttaggtggaggatttggtatttattatagtaaagatgattctccaaaagaa
acaaaagaatattgcgaagctattttaaataaagtagataatgtctgtaaagaagtagga
ctaaaaacacctacgcttgtaattgaacctggaagatcaatagttggtaatactggatta
acattatatactataggatctataaaaaatattccatcgattagaaagtatgtttcggtt
gatggaggaatgacagataatataagacctgctttatataatgctcagtatgaatgtata
gttgcaaatagggttatatatgaatcaaaagaaaaggtcacaatatcaggtaagtgttgt
gaatctggagatatacttttagaggggataaaaataccatcagttttaagtggagactta
ctcgctgtaatgtctactggtgcttatggatattctatggcaaataactacaataaaatt
ccaagaccagcagttgttatggttagagatggtgaaagtagagtaatatgcaagagagaa
agctatgaagatatgataagaaatgaagtgggttaa
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