Clostridium baratii: U729_763
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Entry
U729_763 CDS
T03506
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbv
Clostridium baratii
Pathway
cbv03030
DNA replication
cbv03430
Mismatch repair
cbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U729_763 (dnaE)
03430 Mismatch repair
U729_763 (dnaE)
03440 Homologous recombination
U729_763 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbv03032
]
U729_763 (dnaE)
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_763 (dnaE)
Enzymes [BR:
cbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U729_763 (dnaE)
DNA replication proteins [BR:
cbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U729_763 (dnaE)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U729_763 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
Secretin
HIN
Motif
Other DBs
NCBI-ProteinID:
AIY84634
UniProt:
A0A0A7FYB6
LinkDB
All DBs
Position
complement(843739..847314)
Genome browser
AA seq
1191 aa
AA seq
DB search
MKEKKFCHLHLHTEYSLLDGSGKIKKLVKKAKELGMESMAITDHGVMYGCVDFYKAAKEE
GIKPILGCEVYVASKSMHIKNVDKDNTTNHLVLLVKNEVGYENLMKIVSEASIEGFYYKP
RVDHDYLRKHSEGIIALSACLGGEVQRALLNEDYEKAKEVALAYKDIFKEGFYLELQNHG
MDEQRRVNELNIKLSKETGIPLVATNDVHYIEQKDSKSHDILMCIQTGKTVEDTDRRRYP
SDQFYLKSAEEMYDMFAYVKEALENTVKIADECNFDYEFHVSKLPKFPLPEGADPFIYLR
DTCFMGLIERYDVFKEFLDKPYDYEAVVALGEENEEAKELIDRLQYELGVINQMGYVDYF
LIVWDFIKYSIDNGIPTGPGRGSAAGSIVAYTLGITKIDPIKYSLLFERFLNPERVSMPD
IDSDFCYERRQEVIDYVVEKYGEDNVSQIITFGTMAARACIRDVGRAMNYSYAEVDRIAK
MIPTMLGITIEKALDLNPELKAAYDSEERVKNLIDVSRDLEGLPRHSSTHAAGVVIASKP
LVEYVPLQKNEEMIVTQFGMTTLEELGLLKMDFLGLRTLTVMNDAIKMIKYNRGVDIDLD
KIDFNDKEVYKMIGEGKTAGVFQLESAGMVSFMKELKPDSLEDIIAGISLYRPGPMAEIP
RYIERKRNPDKVEYLTPELEDILNVTYGVMVYQEQVMEIVRKLAGYSMGRSDLVRRAMSK
KKHKVMEEERKNFIYGIEDENGNIEVPGCLRNGISEEVANKIYDMMMDFASYAFNKSHAA
AYAVVGYQTAYLMRYYPVEMIAAMLNSVMGVNEKVAGYIKFAESQGIQVIPPDINKSYSK
FTVEGDKIIFGLAAIRNVGVNVVEAIVKAREDKGEFTSIMDFINKLDLGAINKRAVESLI
KAGALDSFDVFRSKLLAVYEKLMDGVSGEKKRNIDGQMSLFAIDDEVAMPEVTYPNIKEF
TKKHLLSMEKEMTGVYLSGHPLDEYKKSLEMQTTTSISTINKVHKALEDNISKGISIDEI
INQMPIKDNEQVILGGILTEVKQKVTRNNTIMAFLKLEDLDGEIEVIVFPRTLDRIRESI
AEDALVTIKGRINIKEDEPPKLICEKVDGLEKVDSNKVYIRVNDNEEAKKINHYIKTDLI
EYKGDSAVYIFNAKDKKSYRLARETWLNLDTDIISVLKETCGEENVKVVSK
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggagaagaaattttgccacttacacttacatacagagtatagtttgctagatgga
tcaggtaagataaaaaagcttgttaaaaaagcaaaagaacttggtatggaaagtatggct
ataacagaccacggagttatgtatggatgtgttgatttttataaagcagctaaagaagaa
ggcattaaacctattcttggatgtgaagtatatgttgcttcaaaatcaatgcatataaaa
aatgttgataaagataatacaactaatcacttagttttattagtaaaaaatgaagttgga
tatgagaacttaatgaaaattgtatctgaagcatctattgaaggtttttattacaagcct
agagttgaccatgattacttaagaaagcatagtgaaggtattattgcattaagtgcttgc
cttggaggtgaagttcaaagagctttacttaatgaggactatgaaaaggcaaaagaagtt
gctttagcttataaagatatatttaaagaaggcttttacttagaacttcaaaatcatggg
atggatgaacaaagaagagttaatgaattaaatataaagctatctaaagaaactggaata
cctttagttgctacaaatgatgttcattatatagagcaaaaggattcaaaatcacatgat
attttaatgtgtattcaaacaggaaaaacagttgaagatactgatagaagaagatatcca
tcagatcaattctatctaaaatcagctgaggaaatgtatgatatgtttgcatatgtaaaa
gaagctttagagaatactgttaaaattgcagatgaatgtaattttgattacgagttccat
gtatctaagcttcctaaattcccattgccagagggggcagaccctttcatatatctaaga
gatacatgctttatggggcttattgaaagatatgatgtatttaaggaattcttagataaa
ccttatgactatgaagcagttgtagctttaggagaagagaatgaagaggcaaaggaatta
attgatagacttcaatatgagcttggagtaataaatcaaatgggatacgttgattacttc
ctaattgtatgggactttataaagtattctatagataatggaatacctacaggtccaggt
agaggatcagcggcaggttcaatagttgcgtacactcttggaataacaaagatagatcca
ataaaatatagcttactttttgaaagattcttaaatcctgaaagagtaagtatgccggat
atcgattcagatttttgttatgagagaagacaagaagtaattgattatgtagttgaaaag
tatggagaagataatgtatctcaaataattacttttggaacaatggcagcaagggcttgt
ataagagacgtaggaagagccatgaattattcttatgcagaagttgatagaatagctaag
atgattcctacaatgcttggaataactatagaaaaggcattagaccttaatccagaactt
aaagcagcttatgacagtgaggaaagagttaaaaatcttattgatgtaagtagggactta
gaaggacttccaagacactcatcaactcacgcagctggagttgttattgcatcaaaacct
ttagttgaatatgtaccacttcaaaaaaatgaagaaatgatagtaactcaatttggtatg
acaacacttgaagaacttggacttttaaagatggacttcttaggtcttagaactttaaca
gttatgaatgatgcaataaaaatgattaaatacaatagaggcgtagatattgatttagat
aaaatagattttaatgataaagaagtttataaaatgataggtgaaggaaaaacagctggt
gtattccaattagaatcagcaggaatggtatctttcatgaaagaacttaaaccagattca
ttagaagatattatagccggtatttcactttatagaccaggtccaatggctgaaattcca
agatatatagaaagaaaaagaaacccagataaggttgaatatttaacaccagagcttgaa
gacatactaaatgttacatacggagttatggtttatcaagagcaggttatggagatagtt
agaaagcttgctggatattcaatgggaagaagtgaccttgttagaagagctatgtctaag
aaaaagcataaggttatggaagaagaaagaaagaactttatatatggaatagaagacgaa
aatggaaatatagaagttcctggttgcttaagaaatggtatttcagaagaagtagcaaat
aaaatatatgatatgatgatggatttcgcatcctatgcatttaacaaatcacatgccgca
gcttatgcagtagttggttatcaaacagcatatcttatgagatattatccagtagaaatg
attgcagctatgcttaactccgttatgggagtaaatgaaaaagttgcaggatatataaaa
tttgcggaaagccaaggaatacaagtaatacctccagatataaataagagttattcaaag
tttactgttgaaggtgataaaattatatttggtcttgcagctataagaaatgtgggtgtc
aacgttgttgaagctattgtaaaggctagagaagataaaggcgaattcacttcaataatg
gactttataaataaattagacttaggagctataaataagagagctgttgaaagtttaata
aaagctggagctttagattcatttgatgtatttagatcaaaattacttgccgtttatgaa
aagttgatggatggtgtctctggtgagaagaagagaaatatagatgggcaaatgagccta
tttgctatagatgatgaagtagcaatgccagaggtaacttatcctaacataaaggaattt
acaaaaaaacatttattatcaatggaaaaagaaatgacaggggtatacctatcaggtcat
cctttagatgaatataaaaagagtttagagatgcaaacaacaacatcaataagcactata
aataaggttcacaaagccttagaagataatatatcaaaaggaatatctattgatgaaatt
ataaatcaaatgccaattaaagataacgaacaagtaatattaggtggaatacttacagaa
gtaaaacaaaaagtaactagaaataatactataatggctttcttaaagcttgaagattta
gatggtgaaatagaagttatagtatttccaagaacgctagataggattagagaatcaata
gcagaggatgctttagttacgataaaaggtagaataaatattaaagaagatgaaccacca
aaacttatttgtgagaaggttgacggacttgaaaaagttgattcaaataaagtttatata
agggttaatgataatgaggaagcaaagaaaataaatcattatattaaaactgatcttata
gaatataaaggtgattcagcagtatatatttttaacgcaaaagataaaaaaagctataga
ttagcaagagaaacttggttaaatttagatacagatataataagtgttctaaaggaaact
tgtggcgaagaaaatgtaaaagtagtatcaaaataa
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