Clostridium baratii: U729_780
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Entry
U729_780 CDS
T03506
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cbv
Clostridium baratii
Pathway
cbv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U729_780 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbv03400
]
U729_780 (uvrB)
DNA repair and recombination proteins [BR:
cbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U729_780 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U729_780 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
T2SSE
Kinesin
Microtub_bd
AAA_22
AAA_5
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIY84605
UniProt:
A0A0A7G095
LinkDB
All DBs
Position
complement(869188..871167)
Genome browser
AA seq
659 aa
AA seq
DB search
MGEFKIKSNFKPMGDQPEAIDKLVKSINDGNEFQTLLGVTGSGKTFTMANIIERTQKPTI
VLAHNKTLAAQLCAEFKEFFPDSIVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGNPDEYKKLTISLRTGMQKDRDEIIRKLIEIQY
ERNDIDFTRGTFRVRGDSLDIIPASSSSQGIRVEFFGDEIDRIREFDVLTGKILGERNHA
QIYPASHFAASKEVLEKSITVIEEELEERLRELNAQDKLLEAQRLRQRTNFDIEMIREMG
YCSGIENYSRILDGRAPGTPPKTLLDYFPKDDYLMFIDESHVTLPQVRAMYAGDRSRKDS
LVEYGFRLPCAYDNRPLKFEEFEKKINQVVFVSATPAKYEVEHSKVTAEQIIRPTGLLDP
QIIIKPVNGQIDDLYGEIIETTKRGFRTLITTLTKKMAEDLTKYLTDLGVKATYMHSDID
TIERMKIIRDLRLGKFDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLVQTIGR
AARNSESKVIMYADTITGSMDRAISETERRRSIQEKYNEEHNIVPKTIIKDVREVIEATK
VAEEETKYEIESQPKKMTKKEKEKLIKEYTDEMLDAAKNLQFERAAELRDIIETLKGKK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatttaaaataaagtcaaattttaagccgatgggagatcagccagaggctata
gataaattagtaaagtcaataaatgatggtaatgaatttcaaacccttcttggagtaaca
gggtctggtaaaacttttactatggcaaacataatagaaagaactcaaaaacctactata
gtattagctcataataaaactttagcagcacaactttgtgcagagtttaaagagtttttc
ccagatagtatagtagaatattttgtttcatattatgattactatcaaccagaagcgtat
gtaccacaaactgatacatttattgaaaaagatgcatcaataaatgatgaaattgataaa
ttacgtcactccgctacatcagcattatttgaaagaagagatgtaataatagttgcatca
gtatcatgtatatatggacttggtaatccagatgaatataagaaacttacaataagtctt
aggactggaatgcaaaaggatagagatgagataattagaaaacttatagaaatacaatat
gaaagaaatgatattgattttactagaggaacatttagagtaagaggagattcattagat
ataattcctgcatcatcatcaagtcaaggaataagagtagaattctttggagatgaaatt
gatagaataagagaatttgatgtgttaacaggaaaaatattaggtgaaagaaatcatgct
cagatttatcctgcatctcactttgctgcgtcaaaagaagtattagaaaaatctataaca
gtaatagaagaagaattagaagaaagacttagagaacttaatgctcaagataagttacta
gaggcacaaagattaagacaaagaactaattttgatatagaaatgattagagaaatggga
tactgtagtggaatagaaaattattcaagaatactagacggtagagcaccaggaactcca
ccaaagacacttcttgactacttcccaaaagatgattacttaatgtttattgatgaaagt
cacgtaacacttcctcaagttagggcaatgtatgcaggtgatagatcaagaaaagattca
ttagttgaatatggttttagacttccttgtgcttatgataatagaccattaaaattcgaa
gagtttgagaagaaaataaatcaagtcgtattcgtaagtgcaactccagctaaatatgaa
gttgaacattctaaagttacagcagaacaaataattagaccgacaggacttttagatcca
caaataattataaagccagttaatggtcagattgatgatttatatggagaaattatagaa
actacaaagagaggattcagaactcttattacaacattaactaagaaaatggcagaggat
ttaactaagtatttaactgaccttggagtaaaggcaacatatatgcactctgatatagat
actattgaaagaatgaagataataagagatttaagacttggtaaatttgatgttttagta
ggaattaaccttttaagagaagggcttgatattccggaagttgctcttgttgcaatttta
gatgcagacaaagaaggtttcttaagatctgaaacctcattagttcaaacaataggtaga
gctgcgagaaattcagaaagtaaagttataatgtatgcagatactataacaggttcaatg
gatagagctataagtgaaactgagagaagaagaagcattcaagaaaagtataatgaagaa
cataacatagttcctaagacaattattaaagatgtaagagaagtaattgaagcaactaaa
gttgctgaagaagaaactaagtatgaaatagagtcacaacctaagaagatgactaagaaa
gaaaaagaaaaattaattaaagaatacacagatgaaatgttagatgcagctaaaaatctt
caatttgaaagagcagcagaacttagagatataatagaaaccttaaaaggtaaaaaataa
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