Cupriavidus basilensis: RR42_m0053
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Entry
RR42_m0053 CDS
T03642
Name
(GenBank) ATP-dependent 23S rRNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cbw
Cupriavidus basilensis
Brite
KEGG Orthology (KO) [BR:
cbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbw03009
]
RR42_m0053
Enzymes [BR:
cbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RR42_m0053
Ribosome biogenesis [BR:
cbw03009
]
Prokaryotic type
rRNA helicases
RR42_m0053
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
P-loop_SecA
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
AJG17468
UniProt:
A0A0C4Y3U6
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All DBs
Position
main:84587..86008
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AA seq
473 aa
AA seq
DB search
MTSSPTQSAAPAAAGASFSKLPLSPATLATLEQLGYQTMTPIQAASLPIALAGQDLIAQA
KTGSGKTAAFALALLNRLDARRFDVQALVLCPTRELADQVTQEIRRLARAEENIKILTLC
GGSPMRPQADSLAHGAHIAVGTPGRIMDHLERGTLNLDALNTLVLDEADRMLDMGFFDDI
AYVASHCPKERQTLLFSATYPEGIAKLSQQFLRKPREVKLEEQHDDSKIRQRFFEVADSD
RLNAVGLLLNHFRPVSTLAFCNTKARCRDLVDLLRAQGFEALALHGELDQRERDQVLVQF
ANRSCSVLVATDVAARGLDIAQLEAVINVDVTPDPEVYVHRIGRTGRADQDGWALSLASM
NEMGRVGNIEQAMGAEMEWQPLSDLTPASNERLLPPMVTLQILGGRKEKMRPGDILGALT
GDAGYAKHQIGKINVMDMSTYVAVERSIGREAMRKLNDGTVKGKRVKVRMLTE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacctcaagccctacccaatccgcagcgcccgccgctgccggcgcctctttctccaaa
ctgcccctttcgcccgccacgctggcgacgctggagcagctcggctaccagaccatgacc
ccgatccaggcggccagcctgccgatcgcgctggccggccaggacctgatcgcgcaggcc
aagaccggcagcggcaagaccgccgccttcgcgctggcgctgctcaaccgcctcgatgcg
cgccgtttcgacgtgcaggcgctggtgctgtgccccacgcgtgaactggccgaccaggtc
acgcaggaaatccgccgcctggcgcgcgcggaagaaaacatcaagatcctgacgctgtgc
ggcggctcgccgatgcgcccccaggccgacagcctggcgcatggcgcacatatcgccgtg
ggcacgcccggccgcatcatggatcacctggagcgcggcacgctgaacctggatgcgctc
aacacgctggtgctggacgaagccgaccgcatgctcgacatgggcttcttcgacgacatc
gcctatgtggcgagccactgccccaaggagcgccagacgctgctgttctcggccacttat
cccgaaggcatcgccaaactcagccagcagttcctgcgcaagccgcgcgaggtcaagctg
gaagagcagcacgacgacagcaagatccgccagcgcttcttcgaggtggccgacagcgac
cgcctgaacgccgtgggcctgctgctcaaccatttccgcccggtcagcacgctggccttc
tgcaacaccaaggcccgctgccgcgacctggtcgacctgctgcgcgcgcaaggcttcgaa
gccctggcgctgcacggcgagctggaccagcgcgagcgcgaccaggtgctggtgcagttc
gccaaccgcagctgctcggtgctggtcgccaccgacgtggccgcgcgcgggctggacatt
gcccagctcgaagcggtgatcaacgtcgacgtcacgcccgaccccgaggtctatgtccac
cgcatcggccgcaccggacgcgcggaccaggatggctgggcgcttagcctggcgagcatg
aacgagatgggccgcgtgggcaatatcgagcaggccatgggcgccgagatggagtggcag
cccttgtccgacctgactcccgccagcaacgagcgcctgctgccccccatggtcacgctg
cagatccttggcgggcgcaaggaaaagatgcgccccggcgacatcctcggcgcgctcacc
ggcgacgcaggctacgccaagcaccagatcggcaagatcaacgtgatggacatgtccacc
tacgtggcggtcgagcgttcgatcgggcgcgaggcgatgcgcaagctgaatgacggcaca
gtgaagggcaagcgcgtgaaagtgcgcatgctgacggaataa
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